Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
Ribosomal Proteins L2, RNA binding domain
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Structural constituent of ribosome | The action of a molecule that contributes to the structural integrity of the ribosome. | ||
| Cellular component | Ribosome | An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins. | ||
| Biological process | Translation | The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome. |
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | Translation protein SH3-like [Medicago truncatula] gi|87241572|gb|ABD33430.1| | 10 | ||
| – | PREDICTED: 60S ribosomal protein L8-like [Cicer arietinum] gi|502161332|ref|XP_004512125.1| | 22 | ||
| – | Translation protein SH3-like [Medicago truncatula] gi|87241572|gb|ABD33430.1| | 10 | ||
| – | 50S ribosomal protein L2; TAIR: AT4G36130.1 Ribosomal protein L2 family; Swiss-Prot: sp|P29766|RL8_SOLLC 60S ribosomal protein L8; TrEMBL-Plants: tr|A0A1J7GHV1|A0A1J7GHV1_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0474100 | 22 | ||
| – | 50S ribosomal protein L2; TAIR: AT2G07715.1 Nucleic acid-binding, OB-fold-like protein; Swiss-Prot: sp|P0C8K6|RM02_ORYSA 60S ribosomal protein L2, mitochondrial; TrEMBL-Plants: tr|A0A0L9TDN8|A0A0L9TDN8_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0550100 | 9 | ||
| – | 50S ribosomal protein L2; TAIR: AT4G36130.1 Ribosomal protein L2 family; Swiss-Prot: sp|Q42064|RL83_ARATH 60S ribosomal protein L8-3; TrEMBL-Plants: tr|V7CDF5|V7CDF5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0005300 | 22 | ||
| – | 50S ribosomal protein L2; TAIR: AT4G36130.1 Ribosomal protein L2 family; Swiss-Prot: sp|P29766|RL8_SOLLC 60S ribosomal protein L8; TrEMBL-Plants: tr|A0A0L9TBY3|A0A0L9TBY3_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0382300 | 22 | ||
| – | 50S ribosomal protein L2; TAIR: AT4G36130.1 Ribosomal protein L2 family; Swiss-Prot: sp|P29766|RL8_SOLLC 60S ribosomal protein L8; TrEMBL-Plants: tr|A0A0L9TBY3|A0A0L9TBY3_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0382300 | 22 | ||
| – | 50S ribosomal protein L2; TAIR: AT4G36130.1 Ribosomal protein L2 family; Swiss-Prot: sp|Q42064|RL83_ARATH 60S ribosomal protein L8-3; TrEMBL-Plants: tr|V7CDF5|V7CDF5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0127000 | 22 | ||
| – | Ribosomal protein L2 family; TAIR: AT4G36130.1 Ribosomal protein L2 family; Swiss-Prot: sp|P29766|RL8_SOLLC 60S ribosomal protein L8; TrEMBL-Plants: tr|A0A1J7H357|A0A1J7H357_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0167900_LC | 16 | ||
| – | Ribosomal protein L2 family; TAIR: AT4G36130.1 Ribosomal protein L2 family; Swiss-Prot: sp|P29766|RL8_SOLLC 60S ribosomal protein L8; TrEMBL-Plants: tr|A0A1J7H357|A0A1J7H357_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0167900_LC | 16 | ||
| – | Ribosomal protein L2 family; TAIR: AT4G36130.1 Ribosomal protein L2 family; Swiss-Prot: sp|P29766|RL8_SOLLC 60S ribosomal protein L8; TrEMBL-Plants: tr|A0A1J7H357|A0A1J7H357_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0167900_LC | 16 | ||
| – | Ribosomal protein L2 family; TAIR: AT4G36130.1 Ribosomal protein L2 family; Swiss-Prot: sp|P29766|RL8_SOLLC 60S ribosomal protein L8; TrEMBL-Plants: tr|A0A1J7H357|A0A1J7H357_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0167900_LC | 16 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| mobidb-lite | MobiDBLite | 1 | 7.69 |