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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR024166
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

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Download the entire search result as a CSV file.

We have found 3 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.905s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0166159.1
n.a. PREDICTED: ribosomal RNA assembly protein mis3-like [Glycine max] gi|356501320|ref|XP_003519473.1| chr0 79016938 79020913 +
3 domain predictions
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Lj2g3v2937480.1
n.a. PREDICTED: ribosomal RNA assembly protein mis3-like [Glycine max] gi|356501320|ref|XP_003519473.1| chr2 38280873 38284785 +
3 domain predictions
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LotjaGi1g1v0058400.1
n.a. KRR1 small subunit processome component; TAIR: AT5G08420.1 RNA-binding KH domain-containing protein; Swiss-Prot: sp|O74777|KRR1_SCHPO KRR1 small subunit processome component homolog; TrEMBL-Plants: tr|I1JIP3|I1JIP3_SOYBN KRR1 small subunit processome component; Found in the gene: LotjaGi1g1v0058400 LjG1.1_chr1 8151283 8155580 -
3 domain predictions
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