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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR026728
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

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Download the entire search result as a CSV file.

We have found 8 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 7.090s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0111239.1
n.a. Uncharacterized protein isoform 1 [Theobroma cacao] gi|508720697|gb|EOY12594.1| chr0 48303244 48313192 -
2 domain predictions
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Lj0g3v0111239.2
n.a. Uncharacterized protein isoform 1 [Theobroma cacao] gi|508720697|gb|EOY12594.1| chr0 48304545 48313385 -
2 domain predictions
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Lj3g3v1011180.1
n.a. Uncharacterized protein isoform 1 [Theobroma cacao] gi|508720697|gb|EOY12594.1| chr3 13513520 13519572 -
2 domain predictions
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Lj3g3v1011180.2
n.a. Uncharacterized protein isoform 1 [Theobroma cacao] gi|508720697|gb|EOY12594.1| chr3 13513520 13525522 -
2 domain predictions
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Lj3g3v1543530.1
n.a. Uncharacterized protein isoform 1 [Theobroma cacao] gi|508720697|gb|EOY12594.1| chr3 19800309 19808679 -
2 domain predictions
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LotjaGi3g1v0150800.1
n.a. UHRF1-binding protein 1; TAIR: AT3G20720.2 amino-terminal region of chorein; Swiss-Prot: sp|Q6BDS2|URFB1_HUMAN UHRF1-binding protein 1; TrEMBL-Plants: tr|A0A1J7GZD2|A0A1J7GZD2_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0150800 LjG1.1_chr3 20284797 20296866 -
2 domain predictions
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LotjaGi3g1v0150800.2
n.a. UHRF1-binding protein 1; TAIR: AT3G20720.2 amino-terminal region of chorein; Swiss-Prot: sp|A4XY32|ISPG_PSEMY 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin); TrEMBL-Plants: tr|A0A1J7GZD2|A0A1J7GZD2_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0150800 LjG1.1_chr3 20284806 20293455 -
2 domain predictions
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LotjaGi3g1v0235500.1
n.a. UHRF1-binding protein 1-like; TAIR: AT3G20720.2 amino-terminal region of chorein; Swiss-Prot: sp|A2RSJ4|UH1BL_MOUSE UHRF1-binding protein 1-like; TrEMBL-Plants: tr|K7LW91|K7LW91_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0235500 LjG1.1_chr3 37453877 37464912 +
2 domain predictions
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