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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR028934
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 7 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.132s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0286439.1
n.a. PREDICTED: vacuolar protein sorting-associated protein 26B-like [Cicer arietinum] gi|502156146|ref|XP_004510330.1| chr0 148812963 148818535 +
2 domain predictions
1 GO term
Lj0g3v0336579.1
n.a. PREDICTED: Down syndrome critical region protein 3 homolog isoform X2 [Cicer arietinum] gi|502163164|ref|XP_004512747.1| chr0 176281619 176285682 -
2 domain predictions
1 GO term
Lj0g3v0336579.2
n.a. PREDICTED: Down syndrome critical region protein 3 homolog isoform X1 [Cicer arietinum] gi|502163161|ref|XP_004512746.1| chr0 176281619 176285682 -
2 domain predictions
1 GO term
LotjaGi2g1v0196200.1
n.a. Down syndrome critical region protein 3 like; TAIR: AT1G48550.1 Vacuolar protein sorting-associated protein 26; Swiss-Prot: sp|O14972|DSCR3_HUMAN Down syndrome critical region protein 3; TrEMBL-Plants: tr|A0A151TEM0|A0A151TEM0_CAJCA Down syndrome critical region protein 3 isogeny; Found in the gene: LotjaGi2g1v0196200 LjG1.1_chr2 63051371 63061000 +
3 domain predictions
1 GO term
LotjaGi2g1v0196200.2
n.a. Down syndrome critical region protein 3 like; TAIR: AT1G48550.1 Vacuolar protein sorting-associated protein 26; Swiss-Prot: sp|O35075|DSCR3_MOUSE Down syndrome critical region protein 3 homolog; TrEMBL-Plants: tr|A0A151TEM0|A0A151TEM0_CAJCA Down syndrome critical region protein 3 isogeny; Found in the gene: LotjaGi2g1v0196200 LjG1.1_chr2 63051457 63059566 +
3 domain predictions
1 GO term
LotjaGi3g1v0373900.1
n.a. Vacuolar protein sorting-associated; TAIR: AT5G53530.1 vacuolar protein sorting 26A; Swiss-Prot: sp|Q9FJD0|VP26A_ARATH Vacuolar protein sorting-associated protein 26A; TrEMBL-Plants: tr|A0A072TM21|A0A072TM21_MEDTR Vacuolar protein sorting-associated protein 26A; Found in the gene: LotjaGi3g1v0373900 LjG1.1_chr3 76598746 76610056 -
3 domain predictions
1 GO term
LotjaGi3g1v0373900.2
n.a. Vacuolar protein sorting-associated; TAIR: AT5G53530.1 vacuolar protein sorting 26A; Swiss-Prot: sp|Q9FJD0|VP26A_ARATH Vacuolar protein sorting-associated protein 26A; TrEMBL-Plants: tr|A0A072TM21|A0A072TM21_MEDTR Vacuolar protein sorting-associated protein 26A; Found in the gene: LotjaGi3g1v0373900 LjG1.1_chr3 76604383 76609464 -
3 domain predictions
1 GO term