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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR029001
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 15 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 8.159s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0172749.1
n.a. PREDICTED: inosine triphosphate pyrophosphatase-like [Cicer arietinum] gi|502122466|ref|XP_004497758.1| chr0 83060304 83062721 -
3 domain predictions
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Lj0g3v0172759.1
n.a. PREDICTED: inosine triphosphate pyrophosphatase-like [Cicer arietinum] gi|502122466|ref|XP_004497758.1| chr0 83063001 83064181 -
3 domain predictions
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Lj4g3v0961070.1
n.a. PREDICTED: maf-like protein DDB_G0281937-like [Glycine max] gi|356561237|ref|XP_003548889.1| chr4 13991531 13995430 +
3 domain predictions
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Lj5g3v0104850.1
n.a. PREDICTED: maf-like protein DDB_G0281937-like isoform X2 [Cicer arietinum] gi|502126048|ref|XP_004499160.1| chr5 880027 882841 +
3 domain predictions
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Lj5g3v0104850.2
n.a. PREDICTED: maf-like protein DDB_G0281937-like isoform 2 [Fragaria vesca subsp]. vesca] gi|470111278|ref|XP_004291875.1| chr5 880027 882841 +
3 domain predictions
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Lj5g3v0106040.1
n.a. Maf-like protein [Arachis hypogaea] gi|194466227|gb|ACF74344.1| chr5 914741 915231 +
3 domain predictions
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LotjaGi1g1v0416900.1
n.a. Maf-like protein; TAIR: AT5G66550.1 Maf-like protein; Swiss-Prot: sp|Q54TC5|MAFL2_DICDI Maf-like protein DDB_G0281937; TrEMBL-Plants: tr|I1MNF8|I1MNF8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0416900 LjG1.1_chr1 91009453 91016219 +
3 domain predictions
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LotjaGi4g1v0117500.1
n.a. Maf-like protein; TAIR: AT5G66550.2 Maf-like protein; Swiss-Prot: sp|Q54TC5|MAFL2_DICDI Maf-like protein DDB_G0281937; TrEMBL-Plants: tr|I1MNF8|I1MNF8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0117500 LjG1.1_chr4 16990324 16995130 +
3 domain predictions
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LotjaGi5g1v0015700.1
n.a. Maf-like protein; TAIR: AT5G42770.3 Maf-like protein; Swiss-Prot: sp|Q54TC5|MAFL2_DICDI Maf-like protein DDB_G0281937; TrEMBL-Plants: tr|I3T5C3|I3T5C3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0015700 LjG1.1_chr5 3111593 3116882 -
3 domain predictions
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LotjaGi5g1v0015700.2
n.a. Maf-like protein; TAIR: AT5G42770.3 Maf-like protein; Swiss-Prot: sp|Q54TC5|MAFL2_DICDI Maf-like protein DDB_G0281937; TrEMBL-Plants: tr|I3T5C3|I3T5C3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0015700 LjG1.1_chr5 3112115 3116787 -
3 domain predictions
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LotjaGi5g1v0015700.3
n.a. Maf-like protein; TAIR: AT5G42770.3 Maf-like protein; Swiss-Prot: sp|Q54TC5|MAFL2_DICDI Maf-like protein DDB_G0281937; TrEMBL-Plants: tr|K7MNV4|K7MNV4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0015700 LjG1.1_chr5 3112115 3116787 -
3 domain predictions
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LotjaGi5g1v0015700.4
n.a. Maf-like protein; TAIR: AT5G42770.2 Maf-like protein; Swiss-Prot: sp|Q54TC5|MAFL2_DICDI Maf-like protein DDB_G0281937; TrEMBL-Plants: tr|A0A0S3RQ97|A0A0S3RQ97_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0015700 LjG1.1_chr5 3112115 3116787 -
3 domain predictions
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LotjaGi6g1v0014000_LC.2
n.a. Inosine triphosphate pyrophosphatase; TAIR: AT4G13720.2 Inosine triphosphate pyrophosphatase family protein; Swiss-Prot: sp|F6HS55|ITPA_VITVI Inosine triphosphate pyrophosphatase; TrEMBL-Plants: tr|I3SSJ2|I3SSJ2_LOTJA Inosine triphosphate pyrophosphatase; Found in the gene: LotjaGi6g1v0014000_LC LjG1.1_chr6 2548127 2551594 +
3 domain predictions
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LotjaGi6g1v0014000_LC.3
n.a. Non-canonical purine NTP pyrophosphatase; TAIR: AT4G13720.2 Inosine triphosphate pyrophosphatase family protein; Swiss-Prot: sp|F6HS55|ITPA_VITVI Inosine triphosphate pyrophosphatase; TrEMBL-Plants: tr|I3SSJ2|I3SSJ2_LOTJA Inosine triphosphate pyrophosphatase; Found in the gene: LotjaGi6g1v0014000_LC LjG1.1_chr6 2548127 2551594 +
3 domain predictions
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LotjaGi6g1v0014000_LC.4
n.a. Non-canonical purine NTP pyrophosphatase; TAIR: AT4G13720.2 Inosine triphosphate pyrophosphatase family protein; Swiss-Prot: sp|F6HS55|ITPA_VITVI Inosine triphosphate pyrophosphatase; TrEMBL-Plants: tr|I3SSJ2|I3SSJ2_LOTJA Inosine triphosphate pyrophosphatase; Found in the gene: LotjaGi6g1v0014000_LC LjG1.1_chr6 2548133 2551594 +
3 domain predictions
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