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Lj4g3v0961070.1

Overview

Field	Value
Gene ID	Lj4g3v0961070
Transcript ID	Lj4g3v0961070.1
Lotus japonicus genome version	MG20 v3.0
Description	PREDICTED: maf-like protein DDB_G0281937-like [Glycine max] gi\|356561237\|ref\|XP_003548889.1\|
Working Lj name	n.a.

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Prediction algorithm	Identifier	Start	End	Length	E-value	InterPro ID
PIRSF	PIRSF006305 View details on PIRSF006305 Search for proteins/transripts with this domain View external data on PIRSF006305	1	204	204	4.10E-42	IPR003697 Show description in modal box View details on IPR003697 Search for proteins/transripts with this domain View on EBI InterPro Service
SUPERFAMILY	SSF52972 View details on SSF52972 Search for proteins/transripts with this domain View external data on SSF52972	8	201	194	3.73E-49	IPR029001 Show description in modal box View details on IPR029001 Search for proteins/transripts with this domain View on EBI InterPro Service
Gene3D	G3DSA:3.90.950.10 View details on G3DSA:3.90.950.10 Search for proteins/transripts with this domain View external data on G3DSA:3.90.950.10	8	202	195	1.40E-54	IPR029001 Show description in modal box View details on IPR029001 Search for proteins/transripts with this domain View on EBI InterPro Service
Pfam	PF02545 View details on PF02545 Search for proteins/transripts with this domain View external data on PF02545	9	201	193	1.70E-42	IPR003697 Show description in modal box View details on IPR003697 Search for proteins/transripts with this domain View on EBI InterPro Service
CDD	cd00555 View details on cd00555 Search for proteins/transripts with this domain View external data on cd00555	10	200	191	1.15E-51	IPR003697 Show description in modal box View details on IPR003697 Search for proteins/transripts with this domain View on EBI InterPro Service
PANTHER	PTHR11746 View details on PTHR11746 Search for proteins/transripts with this domain View external data on PTHR11746	19	163	145	3.10E-29	–
PANTHER	PTHR11746:SF89 View details on PTHR11746:SF89 Search for proteins/transripts with this domain View external data on PTHR11746:SF89	19	163	145	3.10E-29	–

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on April 27, 2020, while the GO metadata was last updated on April 27, 2020.

GO term	Namespace	Name	Definition	Relationships
GO:0047429 View details of GO:0047429 AmiGO InterPro QuickGO	Molecular function	Nucleoside-triphosphate diphosphatase activity	Catalysis of the reaction: H2O + a nucleoside triphosphate = diphosphate + a nucleotide.	Subterm of View details of GO:0016462

Genome browser

Expression data

Expression pattern

Expression pattern of Lj4g3v0961070.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj4g3v0961070.1, powered by CORGI.

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