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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR030519
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 13 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.574s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0299799.1
n.a. Plant glycogenin-like starch initiation protein 2 isoform 1 [Theobroma cacao] gi|508724729|gb|EOY16626.1| chr0 155750839 155756089 -
2 domain predictions
4 GO terms
Lj1g3v1300580.1
n.a. PREDICTED: UDP-glucuronate:xylan alpha-glucuronosyltransferase 1-like [Cicer arietinum] gi|502136977|ref|XP_004502919.1| chr1 15474813 15485195 -
2 domain predictions
4 GO terms
Lj5g3v0290470.1
n.a. PREDICTED: UDP-glucuronate:xylan alpha-glucuronosyltransferase 2-like isoform X1 [Cicer arietinum] gi|502125781|ref|XP_004499061.1| chr5 2499654 2504450 -
2 domain predictions
4 GO terms
LotjaGi1g1v0169400.1
n.a. Hexosyltransferase; TAIR: AT1G77130.1 plant glycogenin-like starch initiation protein 2; Swiss-Prot: sp|Q8W4A7|GUX3_ARATH Putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 3; TrEMBL-Plants: tr|I1JHP2|I1JHP2_SOYBN Hexosyltransferase; Found in the gene: LotjaGi1g1v0169400 LjG1.1_chr1 32186544 32191891 -
2 domain predictions
4 GO terms
LotjaGi1g1v0169400.2
n.a. Hexosyltransferase; TAIR: AT1G77130.1 plant glycogenin-like starch initiation protein 2; Swiss-Prot: sp|Q8W4A7|GUX3_ARATH Putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 3; TrEMBL-Plants: tr|A0A072VF97|A0A072VF97_MEDTR Hexosyltransferase; Found in the gene: LotjaGi1g1v0169400 LjG1.1_chr1 32186987 32190165 -
2 domain predictions
4 GO terms
LotjaGi1g1v0169400.3
n.a. Hexosyltransferase; TAIR: AT1G77130.1 plant glycogenin-like starch initiation protein 2; Swiss-Prot: sp|Q8W4A7|GUX3_ARATH Putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 3; TrEMBL-Plants: tr|A0A072VF97|A0A072VF97_MEDTR Hexosyltransferase; Found in the gene: LotjaGi1g1v0169400 LjG1.1_chr1 32186987 32190313 -
2 domain predictions
4 GO terms
LotjaGi1g1v0317600.1
n.a. Hexosyltransferase; TAIR: AT3G18660.2 plant glycogenin-like starch initiation protein 1; Swiss-Prot: sp|Q9LSB1|GUX1_ARATH UDP-glucuronate:xylan alpha-glucuronosyltransferase 1; TrEMBL-Plants: tr|K7KV68|K7KV68_SOYBN Hexosyltransferase; Found in the gene: LotjaGi1g1v0317600 LjG1.1_chr1 76511719 76521227 +
2 domain predictions
4 GO terms
LotjaGi1g1v0317600.2
n.a. Hexosyltransferase; TAIR: AT3G18660.2 plant glycogenin-like starch initiation protein 1; Swiss-Prot: sp|Q9LSB1|GUX1_ARATH UDP-glucuronate:xylan alpha-glucuronosyltransferase 1; TrEMBL-Plants: tr|K7KV68|K7KV68_SOYBN Hexosyltransferase; Found in the gene: LotjaGi1g1v0317600 LjG1.1_chr1 76511732 76519417 +
2 domain predictions
4 GO terms
LotjaGi1g1v0317600.3
n.a. Hexosyltransferase; TAIR: AT3G18660.1 plant glycogenin-like starch initiation protein 1; Swiss-Prot: sp|Q9LSB1|GUX1_ARATH UDP-glucuronate:xylan alpha-glucuronosyltransferase 1; TrEMBL-Plants: tr|K7KV68|K7KV68_SOYBN Hexosyltransferase; Found in the gene: LotjaGi1g1v0317600 LjG1.1_chr1 76515232 76517959 +
2 domain predictions
4 GO terms
LotjaGi1g1v0317600.4
n.a. Hexosyltransferase; TAIR: AT3G18660.1 plant glycogenin-like starch initiation protein 1; Swiss-Prot: sp|Q9LSB1|GUX1_ARATH UDP-glucuronate:xylan alpha-glucuronosyltransferase 1; TrEMBL-Plants: tr|K7KV68|K7KV68_SOYBN Hexosyltransferase; Found in the gene: LotjaGi1g1v0317600 LjG1.1_chr1 76515247 76517959 +
2 domain predictions
4 GO terms
LotjaGi5g1v0028600.1
n.a. Hexosyltransferase; TAIR: AT4G33330.1 plant glycogenin-like starch initiation protein 3; Swiss-Prot: sp|Q8GWW4|GUX2_ARATH UDP-glucuronate:xylan alpha-glucuronosyltransferase 2; TrEMBL-Plants: tr|I1M8L8|I1M8L8_SOYBN Hexosyltransferase; Found in the gene: LotjaGi5g1v0028600 LjG1.1_chr5 4714370 4719580 -
2 domain predictions
4 GO terms
LotjaGi5g1v0028600.2
n.a. Hexosyltransferase; TAIR: AT4G33330.1 plant glycogenin-like starch initiation protein 3; Swiss-Prot: sp|Q8GWW4|GUX2_ARATH UDP-glucuronate:xylan alpha-glucuronosyltransferase 2; TrEMBL-Plants: tr|I1M8L8|I1M8L8_SOYBN Hexosyltransferase; Found in the gene: LotjaGi5g1v0028600 LjG1.1_chr5 4715075 4719530 -
2 domain predictions
4 GO terms
LotjaGi5g1v0028600.3
n.a. Hexosyltransferase; TAIR: AT4G33330.1 plant glycogenin-like starch initiation protein 3; Swiss-Prot: sp|Q8GWW4|GUX2_ARATH UDP-glucuronate:xylan alpha-glucuronosyltransferase 2; TrEMBL-Plants: tr|I1M8L8|I1M8L8_SOYBN Hexosyltransferase; Found in the gene: LotjaGi5g1v0028600 LjG1.1_chr5 4715330 4718607 -
2 domain predictions
4 GO terms