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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR031926
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

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Download the entire search result as a CSV file.

We have found 5 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 8.067s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0309019.1
n.a. Transmembrane protein [Medicago truncatula] gi|357440863|ref|XP_003590709.1| chr0 161394591 161399749 +
2 domain predictions
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Lj6g3v1139640.1
n.a. Uncharacterized protein TCM_034905 [Theobroma cacao] gi|508724106|gb|EOY16003.1| chr6 14026335 14030890 +
2 domain predictions
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LotjaGi5g1v0161500_LC.2
n.a. Transmembrane protein 135 family; TAIR: AT5G51150.1 Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein; Swiss-Prot: sp|Q3ZBE6|TM135_BOVIN Transmembrane protein 135; TrEMBL-Plants: tr|A0A151T112|A0A151T112_CAJCA Transmembrane protein 135 family; Found in the gene: LotjaGi5g1v0161500_LC LjG1.1_chr5 41465046 41469385 -
2 domain predictions
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LotjaGi6g1v0219900.1
n.a. Transmembrane protein; TAIR: AT1G34630.1 transmembrane protein; Swiss-Prot: sp|Q6GQ39|TM135_XENLA Transmembrane protein 135; TrEMBL-Plants: tr|G7IIR8|G7IIR8_MEDTR Uncharacterized protein; Found in the gene: LotjaGi6g1v0219900 LjG1.1_chr6 52318781 52323914 +
2 domain predictions
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LotjaGi6g1v0219900.2
n.a. transmembrane protein; TAIR: AT1G34630.1 transmembrane protein; Swiss-Prot: sp|Q6GQ39|TM135_XENLA Transmembrane protein 135; TrEMBL-Plants: tr|A0A0S3RHU3|A0A0S3RHU3_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0219900 LjG1.1_chr6 52318843 52323885 +
2 domain predictions
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