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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0219900 |
| Transcript ID | LotjaGi6g1v0219900.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | transmembrane protein; TAIR: AT1G34630.1 transmembrane protein; Swiss-Prot: sp|Q6GQ39|TM135_XENLA Transmembrane protein 135; TrEMBL-Plants: tr|A0A0S3RHU3|A0A0S3RHU3_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0219900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:52318843..52323885) extracted from Lotus japonicus Gifu genome v1.2.
TTCGATTCATTAACTCCCCCGAAACCACCACTCCGCCGCCACCATGTCGCCGTCCGCCGAAGATCCCGGCGGAGCCTGCC TATCCGACCCGCCGGAGACCAACGGCTTCCACAATGACACCAATACGCCGGACGAACCGACCTCTCCTACCGCGCCGCCG CCGCGTCTCCGTTCCCTCCGCCGCGCAGCCGCGCCGGAGAAGCTTCGGAAAGTCGCCGTCGCATCGGCGAAGGGCTTCTC GATCGGAGCTGGTCTCAAGGGCGGTCTCGCTCTCTTCGCGATCCTGGCGCGACTCACGCGGAAAAAGCCGCCAAGGTGAG AGATGAATAACCATTAACCAGAGAATGGCTCTAACTCGATGAACTCCATGTTCGCGTTTTGCAATGGTTGATTGGAATGG TTTATCTTTGTTCAGGAAGGAGATTGTGGTGTCAAATAGTGAAGCCATTGTTACTGCTTTGAAGGAGACACTGAGATACG GTCTCTTCCTTGGAACCTTCGCCGGAACGTTTGTGTCAATGGATGAGCTTATAGCTGCTGTTGGAGGCCATCGCAGGCAT GTTTTACTTTCATATTTTCTTTTTCTGAAATGCATATAGTGTAACAGTAACTATAGGTCAGTTGTAGAAGTGATTCTGGA TCTAAATTGTAGTAAGTGATTCAAAATACTGTGGTTTGAGCTACATGATTTTCAGTAATTGAATGAGTTTGTATTGTAGC ACTTGAAGTTCTATCAGTTTTTGTTATGGTAGTGGCTTTTGTTTTGTTGGGGTTATGGAGTGAGAGTGATTGTGATTGGT TAAGTGTTGTGGTTTCAGGACAGGGAAGTGGAGGGCTATGTTGGCTGGGGCGGTTGCTGGGCATTCGATGCTTTTGACGG GGTTAGAGGCGCAGCACACGAGCTTGGCTATTTATATTCTCATGCGGGCTGCTGTCTTGGCATCTCGTTGTGGGATTAAG AGTGAGCGGTTTGGGAGAATTTGTAAGCCTCTCACGTGGAAGCATGGTGACATTTTCCTCATGTGTCTCTCCTCTTCGCA AATATTGTATGTAATCATCTTTTATGTGCTCTTTCTCTTTCTTGTTATTCATTCATTAGTTTTAGTTTTTACTGGGGAAA ATATGTATTACTACTTTATTAACATAGTTGCCCTTGTTCATGCTTGCTTCTTTATAGTTTTTTAGCTCAGCTCTCCTTTG AATTGGATATCTTCTTTTCTTTTGAATCATGTATTGGTACGTTGCGGTTTCCATATTATCACTGTCTCTGTTTTACTTGA TGGCTTCACAGTTTAAGGTTGTTGAGTGATGTGGATTCCAGTTGTTCTGCTCTGTTTGCGGATAAAGCATGACTGTATTA ATATAGATTGATTCCAAGTGTGATGCTTTGTTGATATAGGAATGCTAATATATGTGCTCCAGTAAAACTCGATGCTGTTG GATTAAATAGTTTCGCATAATGAGTGGCTGGTCTAGTTCAACCAGTGAGCCTTTAACTACCGACTTTGATTTGATCGCTC ATCAATTTGTAGCTAGTTATTTACCCTTTACTCATATTGTCCATGCTATGATTGCCTGAAGCTGCAGGACTTTGCCTTTC CTAGTTTTTACAATTCAATATACATTATTTGCTCATGATGTCCTCCTATAGCAGTATGTCAAGTTAATAGCTACTAGATA AATAGGAAGGTAGCATAGAGCAGAAAAGAACTAACACTGAAAAACATGTTGCTCATCTCTAAATTCTTCTTGTAATCCTT TCTTATATTTATGATATATTAAGAAAGCTTGACATAGCCATGAATTTGTTTATGCAGATATAGCCCTGGCATTTTCTTTC TGGGGCTATTTTTTTGAGACTGGAACTCACTTGATGCTACCTCCTTCTCTTTTTCTCTTAATAATATGATTAAAAGAAGT TTTTTTAAGAAACTTCAATGATAATAGAGAATATTTTGGTTTCAGGTCTGCTTATATATTAAAGCAAGAGAGTTTGCCTG CATCATATAAATCCTTTCTCAATAAACATGGTGGAAAGGATCCAGTTATCTTACAAGGTGTAAAAGATATAGCCAGTGGC AAGCCATTTACTAATTTGGATGCAATAGAGAAATACTACAAGACCGTGGGTGTCGATGTGAAATTAGATCCAAATATGAA AGTCCCATGCTCGGTATGAATTTAAGCATTTGGTGATTCTTGTCATTCTCTTTCAATCTCAATAAGTGTAAATAACACAT GGAAAATAAATAAAGTAAAAGAAAACATAGGTATTAAACAGTGTTCAATATAGAAGTCCGAAGCTGAATTTGATTGCACT GTAACAGTAACAGTAGCATCAATTTCTTCATTATGACCAAATCATGTAAAGTTTGAGTGTGTGACTCTTATGATGGATTA TGATTCATATTTAATCTGGGATTACATGTAACTTGTAAGCTTCATTTTACAAATGTCTGGAACTCGGTGGAACATATAGG TTTTGATCTTTCTTTTCTGTTCTGTGCCCTGAGAAAATTATCCATTCAATTTTAATCATATTTGTATTGAATTTCTCATT ATTTTTGTTACGCATATAAATAGGGATTGGCCTTGTAATTGAGATATGTTGAATATTGTTGAGATAATGAAACCCCTTCT ATCCCTTTGTTCTCTCTTCTCTGTCCCTATTCCCTCTCTTCTCCCTCTCTGAGATTCTGGTTGTATCAATTTTATTCTAT TTACATTTTTGGGTGTTCAACTTTGTCATTCTTGCATGATGCTTCTTATTGAACTATGTACACCAAGTCCTGTTAGAAAC ATTTCACCTAGGTCTGGAAAATTAGTTGGTTCTCTGTTTAAAATCACTGATATTTCTGTTGCTTCTCTCGGTTTAAAATC GCTGATATTTTGCAGATTGTACATGGGAATCAATCATGTGGGGGGCACGTCCTTTCTTTTCTTCTTCAAGCCTACAAAAG AGCATTACCTGTTTATCTTCCGGTTTATTTGATACCTGCTCTAATAGTTCATAGAAAAGGACTTCTACAAAGGTGATACA AATGGAGTACATAGTAACCAATCTCTTCACTGATTTTTCTGTGAGAATTTTATGAAATATGTGTTTTATCAGGACTTTAT TGGTGTCATCTGTCATGTATGGTTGATTTTGTCATGGGAAGGGCTTTGCGGGACGATAAATTATTCCTTTAACATTCTCT ACACACTGTCAAAGTCTAGCACAAAATTAAGATCATGTTTTTTGTTATGGCATTCAAATAGATTATATCGTTTTTCACTT TTGCTCATACTGTCTGTTTTCATAACTGCAGGCCTAACACAATATTGGCCAAGGGTCTTGTTGGCACTGCGAGATCAAGC TTGTTTCTGTCTGTGTATTGCACATCTGCTTGGTTAGCATCTATAAACTTGTTCCGTGCACCGTTATTCCGTTATGGTTG TTTTGCTGCTAAATTTGTTAGTTTATGAGAATTGAGATGTTCAAGATTTCCAATTATGTTGAAAGTTGAAGTGAGATGCT GCCAATACGGCATGTGAGGGTCAATATGTTCCAACAGTTCAGTTGGGAAAATTGTCATTTATTAGAATAAATAAAAGATT TTTTGTTTATGCACTTGCTAGCCTTCTCATTATCTTATTCATCTTTGCTTCACCTTGACAATCAATTTTGTTGAAACTTG AAAGTGAGATGTATAATATGGATATCTCTATTCTTCATCAGGATGTGGACATGCTTTCTATTCAGGATCTTCAGAAGATG TAACGTTCCAATGGTGGCCATGGGAACAGTATGTTGTTTACTGTAGTCACATATTCTTATCTGTTTGCATTATCTGACAT TTAGAGTTCTCCTCGAATTCAATTCACGAGAAAAATATATTATTTCAATTGCCTGAGCAGTTTTGTTTATACTAGTTGAA TTTCGCATTTTCCTGCAGTTCCCTACTGGCCTTGCTCTGGCCATTGAGAAGAAAAGCAGACGAATAGAGATATCATTATA CTGCCTTGCTCGGGCTATTGAGAGCTTCTTCACATGCATAGCTGATGCAGGATATCTGCCACAATCAAGAAGGATTAAGA GAGCTGATGTGATGGTTTTTAGCTTGTCAACAGCCATCATAATGCACTGCTATGCACAGGAGAGGGAAGTTTTCAAATCC AAATATTTGAATGTTCTTGATTGGGTGTTTGGTGTCCCTCCTCCTCCATGTGAAACCCCGCGATACAAAGATGCATAGAT GGAATTGAACTGAATAGTCACTTTGCTCCTTGAAAAATATAGGGTCGATCACCTTAGTCACTGAAAGATGAAAATATCCC TGAAAAATGATAAGCGATCAATTTAGCCCTTGAAAGATGAAAGTTTTGTTAAATTTAGTACTTGAAAGATAAAACATGTA ATAAATTTTAGGAACTATATTATACTTATTTTTTTTAGTTCGGGGACTAAACTTACTGATCTTGAATCTTTCGGGGACTA AAGTGACTATTCAGTTCAGTTGATGGAATTGCTTGCCCAGCAGAGTTTTTTATCTGAAAATTTGCCCCCGGCTTGGTGGT ATGTAAATGATATTTCCCTCTCAAAGAGATTGGTGGCTGGGAACCTGAATATTGTATTAAGAAGGGAAGTACAACGATGG CAGGATGAAAATTGTTTCCTGGAAGCACTCTGATGAGATTGAAGGAGGTTTCGGCTGGTTATTGCGACATGAGATTTTTT CAAGCGAAGAGCAGACCAACTAATCTATTCATTGGAGCTCTGATCTTATTCACCAAAGTTGCTAAAACCACAAAGGATCA ACTCCTCAGCTGTCTGTGTTTCCTGCTATACCTTCACATATACCATTTGTCTCCTGAGCACTAGATTATAAAAGAAAAAG GGTGTTTTTTACCCTTCACTTTGATTTTTTAATACTATTTAATTGAATTAAGTATTATTACATTTTTTTTCAAAATGAAT TGTTTGTCATTGTCATGACAAACTTCAGATGAGATTTTCAGCAACATATAAGATGTAAATACATCGTTCCCGTCACTTTT TTT
CDS sequence (LotjaGi6g1v0219900.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCGCCGTCCGCCGAAGATCCCGGCGGAGCCTGCCTATCCGACCCGCCGGAGACCAACGGCTTCCACAATGACACCAA TACGCCGGACGAACCGACCTCTCCTACCGCGCCGCCGCCGCGTCTCCGTTCCCTCCGCCGCGCAGCCGCGCCGGAGAAGC TTCGGAAAGTCGCCGTCGCATCGGCGAAGGGCTTCTCGATCGGAGCTGGTCTCAAGGGCGGTCTCGCTCTCTTCGCGATC CTGGCGCGACTCACGCGGAAAAAGCCGCCAAGGAAGGAGATTGTGGTGTCAAATAGTGAAGCCATTGTTACTGCTTTGAA GGAGACACTGAGATACGGTCTCTTCCTTGGAACCTTCGCCGGAACGTTTGTGTCAATGGATGAGCTTATAGCTGCTGTTG GAGGCCATCGCAGGACAGGGAAGTGGAGGGCTATGTTGGCTGGGGCGGTTGCTGGGCATTCGATGCTTTTGACGGGGTTA GAGGCGCAGCACACGAGCTTGGCTATTTATATTCTCATGCGGGCTGCTGTCTTGGCATCTCGTTGTGGGATTAAGAGTGA GCGGTTTGGGAGAATTTGTAAGCCTCTCACGTGGAAGCATGGTGACATTTTCCTCATGTGTCTCTCCTCTTCGCAAATAT TGTCTGCTTATATATTAAAGCAAGAGAGTTTGCCTGCATCATATAAATCCTTTCTCAATAAACATGGTGGAAAGGATCCA GTTATCTTACAAGGTGTAAAAGATATAGCCAGTGGCAAGCCATTTACTAATTTGGATGCAATAGAGAAATACTACAAGAC CGTGGGTGTCGATGTGAAATTAGATCCAAATATGAAAGTCCCATGCTCGATTGTACATGGGAATCAATCATGTGGGGGGC ACGTCCTTTCTTTTCTTCTTCAAGCCTACAAAAGAGCATTACCTGTTTATCTTCCGGTTTATTTGATACCTGCTCTAATA GTTCATAGAAAAGGACTTCTACAAAGGCCTAACACAATATTGGCCAAGGGTCTTGTTGGCACTGCGAGATCAAGCTTGTT TCTGTCTGTGTATTGCACATCTGCTTGGATGTGGACATGCTTTCTATTCAGGATCTTCAGAAGATGTAACGTTCCAATGG TGGCCATGGGAACATTCCCTACTGGCCTTGCTCTGGCCATTGAGAAGAAAAGCAGACGAATAGAGATATCATTATACTGC CTTGCTCGGGCTATTGAGAGCTTCTTCACATGCATAGCTGATGCAGGATATCTGCCACAATCAAGAAGGATTAAGAGAGC TGATGTGATGGTTTTTAGCTTGTCAACAGCCATCATAATGCACTGCTATGCACAGGAGAGGGAAGTTTTCAAATCCAAAT ATTTGAATGTTCTTGATTGGGTGTTTGGTGTCCCTCCTCCTCCATGTGAAACCCCGCGATACAAAGATGCATAG
Protein sequence (LotjaGi6g1v0219900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSPSAEDPGGACLSDPPETNGFHNDTNTPDEPTSPTAPPPRLRSLRRAAAPEKLRKVAVASAKGFSIGAGLKGGLALFAI LARLTRKKPPRKEIVVSNSEAIVTALKETLRYGLFLGTFAGTFVSMDELIAAVGGHRRTGKWRAMLAGAVAGHSMLLTGL EAQHTSLAIYILMRAAVLASRCGIKSERFGRICKPLTWKHGDIFLMCLSSSQILSAYILKQESLPASYKSFLNKHGGKDP VILQGVKDIASGKPFTNLDAIEKYYKTVGVDVKLDPNMKVPCSIVHGNQSCGGHVLSFLLQAYKRALPVYLPVYLIPALI VHRKGLLQRPNTILAKGLVGTARSSLFLSVYCTSAWMWTCFLFRIFRRCNVPMVAMGTFPTGLALAIEKKSRRIEISLYC LARAIESFFTCIADAGYLPQSRRIKRADVMVFSLSTAIIMHCYAQEREVFKSKYLNVLDWVFGVPPPPCETPRYKDA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 63 | 63 | - | – | |
| MobiDBLite | 1 | 42 | 42 | - | – | |
| PANTHER | 49 | 465 | 417 | 4.0E-184 | – | |
| PANTHER | 49 | 465 | 417 | 4.0E-184 | ||
| Phobius | 64 | 82 | 19 | - | – | |
| Phobius | 83 | 141 | 59 | - | – | |
| Phobius | 142 | 160 | 19 | - | – | |
| Phobius | 161 | 165 | 5 | - | – | |
| Phobius | 166 | 184 | 19 | - | – | |
| Phobius | 185 | 306 | 122 | - | – | |
| Pfam | 290 | 410 | 121 | 5.4E-7 | ||
| Phobius | 307 | 326 | 20 | - | – | |
| Phobius | 327 | 345 | 19 | - | – | |
| TMHMM | 344 | 366 | 23 | - | – | |
| Phobius | 346 | 366 | 21 | - | – | |
| Phobius | 367 | 477 | 111 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0219900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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