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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR033177
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 9 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.667s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj2g3v2001390.1
n.a. PREDICTED: phosphatidylserine decarboxylase proenzyme-like isoform X3 [Cicer arietinum] gi|502160315|ref|XP_004511705.1| chr2 29907029 29911909 +
3 domain predictions
2 GO terms
Lj2g3v2001390.2
n.a. PREDICTED: phosphatidylserine decarboxylase proenzyme-like, partial [Glycine max] gi|356540538|ref|XP_003538745.1| chr2 29910850 29911909 +
2 domain predictions
2 GO terms
Lj6g3v2205890.1
n.a. PREDICTED: C2 domain-containing protein C31G5.15-like [Glycine max] gi|356525902|ref|XP_003531560.1| chr6 25586334 25596187 -
2 domain predictions
2 GO terms
Lj6g3v2220930.1
n.a. PREDICTED: phosphatidylserine decarboxylase proenzyme 3-like [Cicer arietinum] gi|502077078|ref|XP_004485545.1| chr6 25921547 25928501 +
2 domain predictions
2 GO terms
Lj6g3v2220930.2
n.a. PREDICTED: C2 domain-containing protein C31G5.15-like [Glycine max] gi|356525902|ref|XP_003531560.1| chr6 25921547 25928501 +
2 domain predictions
2 GO terms
Lj6g3v2221940.1
n.a. PREDICTED: C2 domain-containing protein C31G5.15-like [Glycine max] gi|356525902|ref|XP_003531560.1| chr6 25930397 25933025 +
2 domain predictions
2 GO terms
LotjaGi2g1v0421700.1
n.a. Phosphatidylserine decarboxylase proenzyme; TAIR: AT4G16700.1 phosphatidylserine decarboxylase 1; Swiss-Prot: sp|Q84V22|PSD1_ARATH Phosphatidylserine decarboxylase proenzyme 1, mitochondrial; TrEMBL-Plants: tr|A0A0S3T6A6|A0A0S3T6A6_PHAAN Phosphatidylserine decarboxylase proenzyme 1, mitochondrial; Found in the gene: LotjaGi2g1v0421700 LjG1.1_chr2 91973363 91978433 +
2 domain predictions
2 GO terms
LotjaGi6g1v0355200.2
n.a. Phosphatidylserine decarboxylase proenzyme; TAIR: AT5G57190.1 phosphatidylserine decarboxylase 2; Swiss-Prot: sp|F4KAK5|PSD2_ARATH Phosphatidylserine decarboxylase proenzyme 2; TrEMBL-Plants: tr|I1KUF4|I1KUF4_SOYBN Phosphatidylserine decarboxylase proenzyme 2; Found in the gene: LotjaGi6g1v0355200 LjG1.1_chr6 66717178 66726533 +
2 domain predictions
2 GO terms
LotjaGi6g1v0355200.3
n.a. Phosphatidylserine decarboxylase proenzyme; TAIR: AT5G57190.1 phosphatidylserine decarboxylase 2; Swiss-Prot: sp|F4KAK5|PSD2_ARATH Phosphatidylserine decarboxylase proenzyme 2; TrEMBL-Plants: tr|I1KUF5|I1KUF5_SOYBN Phosphatidylserine decarboxylase proenzyme 2; Found in the gene: LotjaGi6g1v0355200 LjG1.1_chr6 66717272 66725951 +
2 domain predictions
2 GO terms