Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR034102
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

Export options

Download the entire search result as a CSV file.

We have found 4 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.182s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi1g1v0728800.1
n.a. Small nuclear ribonucleoprotein Sm D1; TAIR: AT4G02840.1 Small nuclear ribonucleoprotein family protein; Swiss-Prot: sp|Q3ZC10|SMD1_BOVIN Small nuclear ribonucleoprotein Sm D1; TrEMBL-Plants: tr|I3SRU7|I3SRU7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0728800 LjG1.1_chr1 130040223 130043950 -
2 domain predictions
1 GO term
LotjaGi1g1v0728800.2
n.a. Small nuclear ribonucleoprotein Sm D1; TAIR: AT4G02840.1 Small nuclear ribonucleoprotein family protein; Swiss-Prot: sp|Q3ZC10|SMD1_BOVIN Small nuclear ribonucleoprotein Sm D1; TrEMBL-Plants: tr|I3SRU7|I3SRU7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0728800 LjG1.1_chr1 130040967 130043683 -
2 domain predictions
1 GO term
LotjaGi5g1v0165600.1
n.a. Small nuclear ribonucleoprotein Sm D1; TAIR: AT4G02840.1 Small nuclear ribonucleoprotein family protein; Swiss-Prot: sp|O42661|SMD1_SCHPO Small nuclear ribonucleoprotein Sm D1; TrEMBL-Plants: tr|I3T1V6|I3T1V6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0165600 LjG1.1_chr5 42302553 42306058 +
2 domain predictions
1 GO term
LotjaGi5g1v0165600.2
n.a. Small nuclear ribonucleoprotein Sm D1; TAIR: AT4G02840.1 Small nuclear ribonucleoprotein family protein; Swiss-Prot: sp|O42661|SMD1_SCHPO Small nuclear ribonucleoprotein Sm D1; TrEMBL-Plants: tr|I3T1V6|I3T1V6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0165600 LjG1.1_chr5 42302906 42305045 +
2 domain predictions
1 GO term