Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR034161
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

Export options

Download the entire search result as a CSV file.

We have found 35 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.425s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi1g1v0043800.6
n.a. Eukaryotic aspartyl protease family protein; TAIR: AT3G59080.1 Eukaryotic aspartyl protease family protein; Swiss-Prot: sp|Q766C2|NEP2_NEPGR Aspartic proteinase nepenthesin-2; TrEMBL-Plants: tr|G7KD30|G7KD30_MEDTR Eukaryotic aspartyl protease family protein; Found in the gene: LotjaGi1g1v0043800 LjG1.1_chr1 5945547 5955630 -
2 domain predictions
 –
LotjaGi1g1v0043800.7
n.a. Eukaryotic aspartyl protease family protein; TAIR: AT3G59080.1 Eukaryotic aspartyl protease family protein; Swiss-Prot: sp|Q766C2|NEP2_NEPGR Aspartic proteinase nepenthesin-2; TrEMBL-Plants: tr|G7KD30|G7KD30_MEDTR Eukaryotic aspartyl protease family protein; Found in the gene: LotjaGi1g1v0043800 LjG1.1_chr1 5954017 5955681 -
2 domain predictions
 –
LotjaGi1g1v0088800.1
n.a. Aspartic proteinase nepenthesin-1; TAIR: AT2G39710.1 Eukaryotic aspartyl protease family protein; Swiss-Prot: sp|Q9LZL3|PCS1L_ARATH Aspartic proteinase PCS1; TrEMBL-Plants: tr|A0A0L9U9J8|A0A0L9U9J8_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0088800 LjG1.1_chr1 12869386 12871673 +
2 domain predictions
 –
LotjaGi1g1v0095700.1
n.a. Eukaryotic aspartyl protease family protein; TAIR: AT5G37540.1 Eukaryotic aspartyl protease family protein; Swiss-Prot: sp|Q9LZL3|PCS1L_ARATH Aspartic proteinase PCS1; TrEMBL-Plants: tr|I1MBU0|I1MBU0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0095700 LjG1.1_chr1 14489528 14491370 -
2 domain predictions
 –
LotjaGi1g1v0326900.1
n.a. Aspartic proteinase nepenthesin-1; TAIR: AT2G03200.1 Eukaryotic aspartyl protease family protein; Swiss-Prot: sp|Q766C3|NEP1_NEPGR Aspartic proteinase nepenthesin-1; TrEMBL-Plants: tr|A0A072V2P3|A0A072V2P3_MEDTR Aspartic proteinase nepenthesin; Found in the gene: LotjaGi1g1v0326900 LjG1.1_chr1 78074785 78076922 -
2 domain predictions
 –
LotjaGi1g1v0486300.1
n.a. Eukaryotic aspartyl protease family protein; TAIR: AT1G05840.1 Eukaryotic aspartyl protease family protein; Swiss-Prot: sp|Q9S9K4|ASPL2_ARATH Aspartic proteinase-like protein 2; TrEMBL-Plants: tr|G7KRJ9|G7KRJ9_MEDTR Eukaryotic aspartyl protease family protein; Found in the gene: LotjaGi1g1v0486300 LjG1.1_chr1 99947246 99957508 -
2 domain predictions
 –
LotjaGi1g1v0529700.1
n.a. Eukaryotic aspartyl protease family protein; TAIR: AT1G05840.1 Eukaryotic aspartyl protease family protein; Swiss-Prot: sp|Q9S9K4|ASPL2_ARATH Aspartic proteinase-like protein 2; TrEMBL-Plants: tr|A0A1J7GYN8|A0A1J7GYN8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0529700 LjG1.1_chr1 105684393 105694060 +
2 domain predictions
 –
LotjaGi1g1v0683000.1
n.a. Eukaryotic aspartyl protease family protein; TAIR: AT2G36670.1 Eukaryotic aspartyl protease family protein; Swiss-Prot: sp|Q9S9K4|ASPL2_ARATH Aspartic proteinase-like protein 2; TrEMBL-Plants: tr|G7L4Y6|G7L4Y6_MEDTR Eukaryotic aspartyl protease family protein; Found in the gene: LotjaGi1g1v0683000 LjG1.1_chr1 125031096 125036507 -
2 domain predictions
 –
LotjaGi1g1v0735800.1
n.a. Eukaryotic aspartyl protease family protein; TAIR: AT3G52500.1 Eukaryotic aspartyl protease family protein; Swiss-Prot: sp|Q766C2|NEP2_NEPGR Aspartic proteinase nepenthesin-2; TrEMBL-Plants: tr|A0A072U3B0|A0A072U3B0_MEDTR Eukaryotic aspartyl protease family protein; Found in the gene: LotjaGi1g1v0735800 LjG1.1_chr1 130973146 130975285 +
2 domain predictions
 –
LotjaGi1g1v0744400.1
n.a. Eukaryotic aspartyl protease family protein; TAIR: AT1G64830.1 Eukaryotic aspartyl protease family protein; Swiss-Prot: sp|Q6XBF8|CDR1_ARATH Aspartic proteinase CDR1; TrEMBL-Plants: tr|A0A151RGY3|A0A151RGY3_CAJCA Aspartic proteinase nepenthesin-1; Found in the gene: LotjaGi1g1v0744400 LjG1.1_chr1 131793267 131794682 -
2 domain predictions
 –
LotjaGi2g1v0281900.1
n.a. Eukaryotic aspartyl protease family protein; TAIR: AT3G25700.1 Eukaryotic aspartyl protease family protein; Swiss-Prot: sp|Q9LNJ3|APF2_ARATH Aspartyl protease family protein 2; TrEMBL-Plants: tr|A0A1J7GP01|A0A1J7GP01_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0281900 LjG1.1_chr2 75446946 75448953 -
2 domain predictions
 –
LotjaGi2g1v0378300.1
n.a. Eukaryotic aspartyl protease family protein; TAIR: AT2G17760.1 Eukaryotic aspartyl protease family protein; Swiss-Prot: sp|Q8VYV9|APF1_ARATH Aspartyl protease family protein 1; TrEMBL-Plants: tr|I1LI47|I1LI47_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0378300 LjG1.1_chr2 87537312 87541392 +
2 domain predictions
 –
LotjaGi2g1v0424000.1
n.a. Eukaryotic aspartyl protease family protein; TAIR: AT4G16563.1 Eukaryotic aspartyl protease family protein; Swiss-Prot: sp|Q940R4|ASP63_ARATH Probable aspartyl protease At4g16563; TrEMBL-Plants: tr|A0A0S3T675|A0A0S3T675_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0424000 LjG1.1_chr2 92195938 92198194 +
2 domain predictions
 –
LotjaGi2g1v0448100.1
n.a. Eukaryotic aspartyl protease family protein; TAIR: AT1G64830.1 Eukaryotic aspartyl protease family protein; Swiss-Prot: sp|Q6XBF8|CDR1_ARATH Aspartic proteinase CDR1; TrEMBL-Plants: tr|V7CFT6|V7CFT6_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0448100 LjG1.1_chr2 94192321 94193619 -
2 domain predictions
 –
LotjaGi2g1v0448100.2
n.a. Eukaryotic aspartyl protease family protein; TAIR: AT5G33340.1 Eukaryotic aspartyl protease family protein; Swiss-Prot: sp|Q6XBF8|CDR1_ARATH Aspartic proteinase CDR1; TrEMBL-Plants: tr|V7CFT6|V7CFT6_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0448100 LjG1.1_chr2 94192321 94193619 -
2 domain predictions
 –
LotjaGi3g1v0082000.1
n.a. Eukaryotic aspartyl protease family protein; TAIR: AT1G64830.1 Eukaryotic aspartyl protease family protein; Swiss-Prot: sp|Q6XBF8|CDR1_ARATH Aspartic proteinase CDR1; TrEMBL-Plants: tr|A0A151RGY3|A0A151RGY3_CAJCA Aspartic proteinase nepenthesin-1; Found in the gene: LotjaGi3g1v0082000 LjG1.1_chr3 9160563 9161967 +
2 domain predictions
 –
LotjaGi3g1v0131300.1
n.a. Eukaryotic aspartyl protease family protein; TAIR: AT3G12700.1 Eukaryotic aspartyl protease family protein; Swiss-Prot: sp|Q9LNJ3|APF2_ARATH Aspartyl protease family protein 2; TrEMBL-Plants: tr|K7L738|K7L738_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0131300 LjG1.1_chr3 16384795 16389271 +
2 domain predictions
 –
LotjaGi3g1v0171300.1
n.a. Eukaryotic aspartyl protease family protein; TAIR: AT5G22850.1 Eukaryotic aspartyl protease family protein; Swiss-Prot: sp|Q9S9K4|ASPL2_ARATH Aspartic proteinase-like protein 2; TrEMBL-Plants: tr|I1LTP6|I1LTP6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0171300 LjG1.1_chr3 23592241 23600387 -
2 domain predictions
 –
LotjaGi3g1v0320400.1
n.a. Eukaryotic aspartyl protease family protein; TAIR: AT1G64830.1 Eukaryotic aspartyl protease family protein; Swiss-Prot: sp|Q6XBF8|CDR1_ARATH Aspartic proteinase CDR1; TrEMBL-Plants: tr|A0A151RGY3|A0A151RGY3_CAJCA Aspartic proteinase nepenthesin-1; Found in the gene: LotjaGi3g1v0320400 LjG1.1_chr3 68023393 68024741 -
2 domain predictions
 –
LotjaGi3g1v0320700.1
n.a. Eukaryotic aspartyl protease family protein; TAIR: AT1G64830.1 Eukaryotic aspartyl protease family protein; Swiss-Prot: sp|Q6XBF8|CDR1_ARATH Aspartic proteinase CDR1; TrEMBL-Plants: tr|A0A151RGY3|A0A151RGY3_CAJCA Aspartic proteinase nepenthesin-1; Found in the gene: LotjaGi3g1v0320700 LjG1.1_chr3 68081368 68082714 -
2 domain predictions
 –
LotjaGi3g1v0482000.1
n.a. Eukaryotic aspartyl protease family protein; TAIR: AT5G22850.1 Eukaryotic aspartyl protease family protein; Swiss-Prot: sp|Q9S9K4|ASPL2_ARATH Aspartic proteinase-like protein 2; TrEMBL-Plants: tr|A0A151TNL5|A0A151TNL5_CAJCA Aspartic proteinase-like protein 2; Found in the gene: LotjaGi3g1v0482000 LjG1.1_chr3 89961458 89966055 +
2 domain predictions
 –
LotjaGi3g1v0520700.1
n.a. Eukaryotic aspartyl protease family protein; TAIR: AT5G22850.1 Eukaryotic aspartyl protease family protein; Swiss-Prot: sp|Q9S9K4|ASPL2_ARATH Aspartic proteinase-like protein 2; TrEMBL-Plants: tr|I1LTP6|I1LTP6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0520700 LjG1.1_chr3 93696869 93704998 -
2 domain predictions
 –
LotjaGi4g1v0098400.1
n.a. Eukaryotic aspartyl protease family protein; TAIR: AT5G43100.1 Eukaryotic aspartyl protease family protein; Swiss-Prot: sp|Q9S9K4|ASPL2_ARATH Aspartic proteinase-like protein 2; TrEMBL-Plants: tr|I1MVQ7|I1MVQ7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0098400 LjG1.1_chr4 13298807 13307655 -
2 domain predictions
 –
LotjaGi4g1v0098400.2
n.a. Eukaryotic aspartyl protease family protein; TAIR: AT5G43100.1 Eukaryotic aspartyl protease family protein; Swiss-Prot: sp|Q9S9K4|ASPL2_ARATH Aspartic proteinase-like protein 2; TrEMBL-Plants: tr|I1MVQ7|I1MVQ7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0098400 LjG1.1_chr4 13301951 13307504 -
2 domain predictions
 –
LotjaGi4g1v0199500.1
n.a. Eukaryotic aspartyl protease family protein; TAIR: AT1G64830.1 Eukaryotic aspartyl protease family protein; Swiss-Prot: sp|Q6XBF8|CDR1_ARATH Aspartic proteinase CDR1; TrEMBL-Plants: tr|A0A151RGY3|A0A151RGY3_CAJCA Aspartic proteinase nepenthesin-1; Found in the gene: LotjaGi4g1v0199500 LjG1.1_chr4 46209660 46211014 -
2 domain predictions
 –
LotjaGi5g1v0088600.1
n.a. Eukaryotic aspartyl protease family protein; TAIR: AT2G36670.3 Eukaryotic aspartyl protease family protein; Swiss-Prot: sp|Q9S9K4|ASPL2_ARATH Aspartic proteinase-like protein 2; TrEMBL-Plants: tr|A0A151U373|A0A151U373_CAJCA Aspartic proteinase-like protein 2; Found in the gene: LotjaGi5g1v0088600 LjG1.1_chr5 15085423 15093470 +
2 domain predictions
 –
LotjaGi5g1v0088600.2
n.a. Eukaryotic aspartyl protease family protein; TAIR: AT2G36670.2 Eukaryotic aspartyl protease family protein; Swiss-Prot: sp|Q9S9K4|ASPL2_ARATH Aspartic proteinase-like protein 2; TrEMBL-Plants: tr|A0A0S3ST75|A0A0S3ST75_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0088600 LjG1.1_chr5 15085423 15093470 +
2 domain predictions
 –
LotjaGi5g1v0088600.3
n.a. Eukaryotic aspartyl protease family protein; TAIR: AT2G36670.2 Eukaryotic aspartyl protease family protein; Swiss-Prot: sp|Q9S9K4|ASPL2_ARATH Aspartic proteinase-like protein 2; TrEMBL-Plants: tr|A0A0S3ST75|A0A0S3ST75_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0088600 LjG1.1_chr5 15087858 15092759 +
2 domain predictions
 –
LotjaGi5g1v0202900.1
n.a. Eukaryotic aspartyl protease family protein; TAIR: AT1G05840.1 Eukaryotic aspartyl protease family protein; Swiss-Prot: sp|Q9S9K4|ASPL2_ARATH Aspartic proteinase-like protein 2; TrEMBL-Plants: tr|I3T3U8|I3T3U8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0202900 LjG1.1_chr5 50332877 50339144 +
2 domain predictions
 –
LotjaGi6g1v0055000.1
n.a. Eukaryotic aspartyl protease family protein; TAIR: AT1G66180.1 Eukaryotic aspartyl protease family protein; Swiss-Prot: sp|Q9LZL3|PCS1L_ARATH Aspartic proteinase PCS1; TrEMBL-Plants: tr|G7J8R7|G7J8R7_MEDTR Eukaryotic aspartyl protease family protein; Found in the gene: LotjaGi6g1v0055000 LjG1.1_chr6 9898430 9900543 +
2 domain predictions
 –
LotjaGi6g1v0055000.2
n.a. Eukaryotic aspartyl protease family protein; TAIR: AT1G66180.1 Eukaryotic aspartyl protease family protein; Swiss-Prot: sp|Q9LZL3|PCS1L_ARATH Aspartic proteinase PCS1; TrEMBL-Plants: tr|I1LMA8|I1LMA8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0055000 LjG1.1_chr6 9898671 9900161 +
2 domain predictions
 –
LotjaGi6g1v0062900.1
n.a. Aspartic proteinase nepenthesin; TAIR: AT2G39710.1 Eukaryotic aspartyl protease family protein; Swiss-Prot: sp|Q9LZL3|PCS1L_ARATH Aspartic proteinase PCS1; TrEMBL-Plants: tr|A0A072UYS9|A0A072UYS9_MEDTR Aspartic proteinase nepenthesin; Found in the gene: LotjaGi6g1v0062900 LjG1.1_chr6 11566119 11569783 -
2 domain predictions
 –
LotjaGi6g1v0137200_LC.1
n.a. Eukaryotic aspartyl protease family protein; TAIR: AT1G64830.1 Eukaryotic aspartyl protease family protein; Swiss-Prot: sp|Q6XBF8|CDR1_ARATH Aspartic proteinase CDR1; TrEMBL-Plants: tr|A0A151RGY3|A0A151RGY3_CAJCA Aspartic proteinase nepenthesin-1; Found in the gene: LotjaGi6g1v0137200_LC LjG1.1_chr6 39947287 39948474 +
2 domain predictions
 –
LotjaGi6g1v0174700.1
n.a. Eukaryotic aspartyl protease family protein; TAIR: AT3G59080.1 Eukaryotic aspartyl protease family protein; Swiss-Prot: sp|Q9LS40|ASPG1_ARATH Protein ASPARTIC PROTEASE IN GUARD CELL 1; TrEMBL-Plants: tr|I1N0Z7|I1N0Z7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0174700 LjG1.1_chr6 46499411 46502078 -
2 domain predictions
 –
LotjaGi6g1v0175600.1
n.a. Eukaryotic aspartyl protease family protein; TAIR: AT3G59080.1 Eukaryotic aspartyl protease family protein; Swiss-Prot: sp|Q9LS40|ASPG1_ARATH Protein ASPARTIC PROTEASE IN GUARD CELL 1; TrEMBL-Plants: tr|I1N0Z7|I1N0Z7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0175600 LjG1.1_chr6 46582423 46584838 -
2 domain predictions
 –