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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0043800 |
| Transcript ID | LotjaGi1g1v0043800.7 |
| Related isoforms 6 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Eukaryotic aspartyl protease family protein; TAIR: AT3G59080.1 Eukaryotic aspartyl protease family protein; Swiss-Prot: sp|Q766C2|NEP2_NEPGR Aspartic proteinase nepenthesin-2; TrEMBL-Plants: tr|G7KD30|G7KD30_MEDTR Eukaryotic aspartyl protease family protein; Found in the gene: LotjaGi1g1v0043800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:5954017..5955681) extracted from Lotus japonicus Gifu genome v1.2.
ATGGTTTTGAGGGTTTCTTTCTTTCTGGTTCTCCTTGTGACATGCTCTGTGGTGGAGGTCATTTCTGGGAATCAAAATCA CAATCACAATAGTCTCATCAACAATGGATCTTCTCTGGCTGCAATAAAGTTCCCTGATCACCCAAGTTTCAATGTTGTCT CTGAGGACTCAGGTTGCAGCTTCTCAAATTCAGAGAAACTAGGGAATCTTGATGATGATGAAGGTGGAAAGGGTGAGGCT TCTGTAGCAGAAAAACCACACAAGCAACCATTGAAGCTCCATTTGAAACACAGGCCAGTGAGCAGTGATGTTGGACCAGA AAAGAAGTCTTTGTTTGATTTCACAGCCAAGGACTTGATCAGAATTCAGACCCTTCATAGAAGGTTCATGGAAAAGAAGA ACCAAAACACCATTTCAAGGCTGCAAAAGCAATCAAGTTCAAAGCAGTCCTACAATCCGGGGCGGGCGGTGGCGGTTTCT CCGGCGGCTTCACCGCCGGAATATTTTTCATCCAGCCAGCTTGTGGCAACCTTGGAATCAGGGGTGAGTCTTGGCTCTGG TGAGTACTTCATGGATGTGTTTATTGGAACCCCTCCTAAGCATTTTTCCCTGATACTTGACACTGGTAGTGACCTTAATT GGATTCAATGTGTTCCTTGCATTGCTTGTTTTGAGCAAAGTGGACCTTATTATGATCCTAAGGATTCTAGTTCTTTTAAG AACATAAGCTGCCATGATCCTAGGTGCCAATTGGTTTCATCCCCTGATCCACCAAAGCCTTGCAAGGATGAGAATCAAAC TTGTCCTTACTTCTACTGGTATGGTGATAGTTCCAACACAACTGGTGATTTTGCAGTGGAAACTTTCACTGTTAATCTCA CCCATAATGGGAATTCAGAGCTCAAACATGTGGAGAATGTGATGTTTGGTTGTGGTCATTGGAATAGAGGTCTATTTCAT GGAGCTGCTGGTTTGCTAGGATTGGGAAAAGGACCATTATCTTTTGCTTCTCAGCTTCAATCTCTCTATGGTCATTCCTT TTCCTATTGTCTTGTGGATAGGAACAGCAACTCAAGTGTTAGCAGCAAGTTGATTTTTGGTGAGGATAAAGAGCTTCTCA GCCACCCCAATTTGAATTTCACCTCTTTTGTTGGTGGCAAAGAGAAAGAGAATCAAGTTGATACATTCTACTATGTTCAG ATAAAATCTGTGATGGTTGATGGTGAGGTGCTGAAGATACCAGAGGAGACTTGGAATTTAACAGCAGAAGGTGCTGGTGG CACAATAATTGATTCTGGCACAACCCTAACTTATTTTGCTGACCCTGCTTATGAGATTATAAAACAAGCTTTTGTGAAGA AAATCAAGGGCTATGAACTTGTTGAAGGGCTTCCTCCTCTGAAGCCATGTTACAATGTGTCAGGGATTGAGAAGATGGAG CTACCTGATTTTGGGATCTTGTTTGCAGATGGAGCAGTTTGGGACTTTCCAGTGGAGAATTACTTTATTCAGATTGAATC TGATGTTGTTTGTTTGGCTATTTTGGGGACTCCTAGGTCTGCTCTTTCAATAATTGGAAACTATCAGCAGCAGAATTTTC ACATACTCTATGATATGAAGAAATCTAGACTAGGGTATGCACCAATGAAGTGTGCTGATGTGTGA
CDS sequence (LotjaGi1g1v0043800.7) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTTTTGAGGGTTTCTTTCTTTCTGGTTCTCCTTGTGACATGCTCTGTGGTGGAGGTCATTTCTGGGAATCAAAATCA CAATCACAATAGTCTCATCAACAATGGATCTTCTCTGGCTGCAATAAAGTTCCCTGATCACCCAAGTTTCAATGTTGTCT CTGAGGACTCAGGTTGCAGCTTCTCAAATTCAGAGAAACTAGGGAATCTTGATGATGATGAAGGTGGAAAGGGTGAGGCT TCTGTAGCAGAAAAACCACACAAGCAACCATTGAAGCTCCATTTGAAACACAGGCCAGTGAGCAGTGATGTTGGACCAGA AAAGAAGTCTTTGTTTGATTTCACAGCCAAGGACTTGATCAGAATTCAGACCCTTCATAGAAGGTTCATGGAAAAGAAGA ACCAAAACACCATTTCAAGGCTGCAAAAGCAATCAAGTTCAAAGCAGTCCTACAATCCGGGGCGGGCGGTGGCGGTTTCT CCGGCGGCTTCACCGCCGGAATATTTTTCATCCAGCCAGCTTGTGGCAACCTTGGAATCAGGGGTGAGTCTTGGCTCTGG TGAGTACTTCATGGATGTGTTTATTGGAACCCCTCCTAAGCATTTTTCCCTGATACTTGACACTGGTAGTGACCTTAATT GGATTCAATGTGTTCCTTGCATTGCTTGTTTTGAGCAAAGTGGACCTTATTATGATCCTAAGGATTCTAGTTCTTTTAAG AACATAAGCTGCCATGATCCTAGGTGCCAATTGGTTTCATCCCCTGATCCACCAAAGCCTTGCAAGGATGAGAATCAAAC TTGTCCTTACTTCTACTGGTATGGTGATAGTTCCAACACAACTGGTGATTTTGCAGTGGAAACTTTCACTGTTAATCTCA CCCATAATGGGAATTCAGAGCTCAAACATGTGGAGAATGTGATGTTTGGTTGTGGTCATTGGAATAGAGGTCTATTTCAT GGAGCTGCTGGTTTGCTAGGATTGGGAAAAGGACCATTATCTTTTGCTTCTCAGCTTCAATCTCTCTATGGTCATTCCTT TTCCTATTGTCTTGTGGATAGGAACAGCAACTCAAGTGTTAGCAGCAAGTTGATTTTTGGTGAGGATAAAGAGCTTCTCA GCCACCCCAATTTGAATTTCACCTCTTTTGTTGGTGGCAAAGAGAAAGAGAATCAAGTTGATACATTCTACTATGTTCAG ATAAAATCTGTGATGGTTGATGGTGAGGTGCTGAAGATACCAGAGGAGACTTGGAATTTAACAGCAGAAGGTGCTGGTGG CACAATAATTGATTCTGGCACAACCCTAACTTATTTTGCTGACCCTGCTTATGAGATTATAAAACAAGCTTTTGTGAAGA AAATCAAGGGCTATGAACTTGTTGAAGGGCTTCCTCCTCTGAAGCCATGTTACAATGTGTCAGGGATTGAGAAGATGGAG CTACCTGATTTTGGGATCTTGTTTGCAGATGGAGCAGTTTGGGACTTTCCAGTGGAGAATTACTTTATTCAGATTGAATC TGATGTTGTTTGTTTGGCTATTTTGGGGACTCCTAGGTCTGCTCTTTCAATAATTGGAAACTATCAGCAGCAGAATTTTC ACATACTCTATGATATGAAGAAATCTAGACTAGGGTATGCACCAATGAAGTGTGCTGATGTGTGA
Protein sequence (LotjaGi1g1v0043800.7) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVLRVSFFLVLLVTCSVVEVISGNQNHNHNSLINNGSSLAAIKFPDHPSFNVVSEDSGCSFSNSEKLGNLDDDEGGKGEA SVAEKPHKQPLKLHLKHRPVSSDVGPEKKSLFDFTAKDLIRIQTLHRRFMEKKNQNTISRLQKQSSSKQSYNPGRAVAVS PAASPPEYFSSSQLVATLESGVSLGSGEYFMDVFIGTPPKHFSLILDTGSDLNWIQCVPCIACFEQSGPYYDPKDSSSFK NISCHDPRCQLVSSPDPPKPCKDENQTCPYFYWYGDSSNTTGDFAVETFTVNLTHNGNSELKHVENVMFGCGHWNRGLFH GAAGLLGLGKGPLSFASQLQSLYGHSFSYCLVDRNSNSSVSSKLIFGEDKELLSHPNLNFTSFVGGKEKENQVDTFYYVQ IKSVMVDGEVLKIPEETWNLTAEGAGGTIIDSGTTLTYFADPAYEIIKQAFVKKIKGYELVEGLPPLKPCYNVSGIEKME LPDFGILFADGAVWDFPVENYFIQIESDVVCLAILGTPRSALSIIGNYQQQNFHILYDMKKSRLGYAPMKCADV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_EUK | 1 | 23 | 23 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 20 | 20 | - | – | |
| Phobius | 1 | 20 | 20 | - | – | |
| Phobius | 1 | 4 | 4 | - | – | |
| Phobius | 5 | 15 | 11 | - | – | |
| PANTHER | 7 | 553 | 547 | 3.0E-273 | ||
| PANTHER | 7 | 553 | 547 | 3.0E-273 | – | |
| Phobius | 16 | 20 | 5 | - | – | |
| Phobius | 21 | 554 | 534 | - | – | |
| MobiDBLite | 63 | 89 | 27 | - | – | |
| MobiDBLite | 67 | 89 | 23 | - | – | |
| MobiDBLite | 133 | 157 | 25 | - | – | |
| MobiDBLite | 135 | 154 | 20 | - | – | |
| Gene3D | 164 | 368 | 205 | 8.9E-53 | ||
| SUPERFAMILY | 181 | 552 | 372 | 6.93E-103 | ||
| CDD | 188 | 551 | 364 | 2.68017E-87 | ||
| Pfam | 189 | 367 | 179 | 6.4E-56 | ||
| ProSiteProfiles | 189 | 547 | 359 | 39.001 | ||
| PRINTS | 195 | 215 | 21 | 1.1E-7 | ||
| ProSitePatterns | 204 | 215 | 12 | - | ||
| Gene3D | 369 | 554 | 186 | 1.9E-50 | ||
| Pfam | 396 | 547 | 152 | 1.6E-36 | ||
| PRINTS | 428 | 439 | 12 | 1.1E-7 | ||
| PRINTS | 523 | 538 | 16 | 1.1E-7 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Aspartic-type endopeptidase activity | Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile. | ||
| Biological process | Proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. |
Expression pattern of LotjaGi1g1v0043800.7, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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