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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR036156
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 4 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.809s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi1g1v0773700.1
n.a. Beta-mannosidase, putative; TAIR: AT1G09010.1 glycoside hydrolase family 2 protein; Swiss-Prot: sp|Q5H7P5|EBM_LILLO Mannosylglycoprotein endo-beta-mannosidase; TrEMBL-Plants: tr|A0A151TW65|A0A151TW65_CAJCA Mannosylglycoprotein endo-beta-mannosidase; Found in the gene: LotjaGi1g1v0773700 LjG1.1_chr1 134633862 134640275 -
2 domain predictions
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LotjaGi3g1v0318400.1
n.a. Beta-galactosidase; TAIR: AT3G54440.1 glycoside hydrolase family 2 protein; Swiss-Prot: sp|A5F5U6|BGAL_VIBC3 Beta-galactosidase; TrEMBL-Plants: tr|I1M0S4|I1M0S4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0318400 LjG1.1_chr3 67379930 67389292 -
2 domain predictions
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LotjaGi5g1v0220600.1
n.a. Beta-mannosidase, putative; TAIR: AT1G09010.1 glycoside hydrolase family 2 protein; Swiss-Prot: sp|Q5H7P5|EBM_LILLO Mannosylglycoprotein endo-beta-mannosidase; TrEMBL-Plants: tr|I1NIZ2|I1NIZ2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0220600 LjG1.1_chr5 52699270 52705041 +
2 domain predictions
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LotjaGi5g1v0220600.2
n.a. Beta-mannosidase, putative; TAIR: AT1G09010.1 glycoside hydrolase family 2 protein; Swiss-Prot: sp|Q5H7P5|EBM_LILLO Mannosylglycoprotein endo-beta-mannosidase; TrEMBL-Plants: tr|G7I838|G7I838_MEDTR Endo-beta-mannosidase-like mannosylglycoprotein; Found in the gene: LotjaGi5g1v0220600 LjG1.1_chr5 52699638 52704817 +
2 domain predictions
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