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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR036385
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 8 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.743s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi1g1v0550100.1
n.a. Ribulose bisphosphate carboxylase small chain; TAIR: AT5G38410.1 Ribulose bisphosphate carboxylase (small chain) family protein; Swiss-Prot: sp|P07689|RBS3_PEA Ribulose bisphosphate carboxylase small chain 3A, chloroplastic; TrEMBL-Plants: tr|I3T692|I3T692_LOTJA Ribulose bisphosphate carboxylase small chain; Found in the gene: LotjaGi1g1v0550100 LjG1.1_chr1 108022988 108033010 -
3 domain predictions
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LotjaGi1g1v0550100.2
n.a. Ribulose bisphosphate carboxylase small chain; TAIR: AT5G38410.1 Ribulose bisphosphate carboxylase (small chain) family protein; Swiss-Prot: sp|P07689|RBS3_PEA Ribulose bisphosphate carboxylase small chain 3A, chloroplastic; TrEMBL-Plants: tr|I3T692|I3T692_LOTJA Ribulose bisphosphate carboxylase small chain; Found in the gene: LotjaGi1g1v0550100 LjG1.1_chr1 108028014 108029086 -
3 domain predictions
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LotjaGi1g1v0550100.3
n.a. Ribulose bisphosphate carboxylase small chain; TAIR: AT5G38410.1 Ribulose bisphosphate carboxylase (small chain) family protein; Swiss-Prot: sp|P00869|RBS2_PEA Ribulose bisphosphate carboxylase small chain 3C, chloroplastic; TrEMBL-Plants: tr|I3T692|I3T692_LOTJA Ribulose bisphosphate carboxylase small chain; Found in the gene: LotjaGi1g1v0550100 LjG1.1_chr1 108028014 108029086 -
3 domain predictions
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LotjaGi1g1v0550100.4
n.a. Ribulose bisphosphate carboxylase small chain; TAIR: AT5G38410.1 Ribulose bisphosphate carboxylase (small chain) family protein; Swiss-Prot: sp|P00869|RBS2_PEA Ribulose bisphosphate carboxylase small chain 3C, chloroplastic; TrEMBL-Plants: tr|I3T692|I3T692_LOTJA Ribulose bisphosphate carboxylase small chain; Found in the gene: LotjaGi1g1v0550100 LjG1.1_chr1 108030746 108032905 -
3 domain predictions
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LotjaGi1g1v0550100.5
n.a. Ribulose bisphosphate carboxylase small chain; TAIR: AT5G38410.1 Ribulose bisphosphate carboxylase (small chain) family protein; Swiss-Prot: sp|P07689|RBS3_PEA Ribulose bisphosphate carboxylase small chain 3A, chloroplastic; TrEMBL-Plants: tr|I3SR29|I3SR29_LOTJA Ribulose bisphosphate carboxylase small chain; Found in the gene: LotjaGi1g1v0550100 LjG1.1_chr1 108030791 108046596 -
3 domain predictions
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LotjaGi1g1v0550100.6
n.a. Ribulose bisphosphate carboxylase small chain; TAIR: AT1G67090.1 ribulose bisphosphate carboxylase small chain 1A; Swiss-Prot: sp|P07689|RBS3_PEA Ribulose bisphosphate carboxylase small chain 3A, chloroplastic; TrEMBL-Plants: tr|I3SR29|I3SR29_LOTJA Ribulose bisphosphate carboxylase small chain; Found in the gene: LotjaGi1g1v0550100 LjG1.1_chr1 108044632 108046596 -
3 domain predictions
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LotjaGi2g1v0052900.1
n.a. Ribulose bisphosphate carboxylase small chain; TAIR: AT1G67090.1 ribulose bisphosphate carboxylase small chain 1A; Swiss-Prot: sp|O65194|RBS_MEDSA Ribulose bisphosphate carboxylase small chain, chloroplastic; TrEMBL-Plants: tr|I3S8R8|I3S8R8_LOTJA Ribulose bisphosphate carboxylase small chain; Found in the gene: LotjaGi2g1v0052900 LjG1.1_chr2 10412173 10414787 -
3 domain predictions
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LotjaGi4g1v0302300.1
n.a. Ribulose bisphosphate carboxylase small chain; TAIR: AT5G38430.1 Ribulose bisphosphate carboxylase (small chain) family protein; Swiss-Prot: sp|Q02980|RBS_MALSP Ribulose bisphosphate carboxylase small chain, chloroplastic; TrEMBL-Plants: tr|A0A1B4XTS4|A0A1B4XTS4_LOTJA Ribulose bisphosphate carboxylase small chain; Found in the gene: LotjaGi4g1v0302300 LjG1.1_chr4 67720299 67726564 +
3 domain predictions
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