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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR036509
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 7 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.855s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi1g1v0029700.1
n.a. Peptide methionine sulfoxide reductase MsrA; TAIR: AT5G61640.2 peptidemethionine sulfoxide reductase 1; Swiss-Prot: sp|Q9SEC2|MSRA_LACSA Peptide methionine sulfoxide reductase; TrEMBL-Plants: tr|I1M6S0|I1M6S0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0029700 LjG1.1_chr1 3624419 3627848 +
3 domain predictions
2 GO terms
LotjaGi1g1v0029700.2
n.a. Peptide methionine sulfoxide reductase MsrA; TAIR: AT5G61640.2 peptidemethionine sulfoxide reductase 1; Swiss-Prot: sp|Q9SEC2|MSRA_LACSA Peptide methionine sulfoxide reductase; TrEMBL-Plants: tr|I1M6R8|I1M6R8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0029700 LjG1.1_chr1 3625954 3627452 +
3 domain predictions
2 GO terms
LotjaGi1g1v0030100_LC.1
n.a. Peptide methionine sulfoxide reductase MsrA; TAIR: AT5G61640.1 peptidemethionine sulfoxide reductase 1; Swiss-Prot: sp|Q9SEC2|MSRA_LACSA Peptide methionine sulfoxide reductase; TrEMBL-Plants: tr|I1M6R8|I1M6R8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0030100_LC LjG1.1_chr1 3798329 3798692 +
3 domain predictions
2 GO terms
LotjaGi1g1v0230600.1
n.a. Peptide methionine sulfoxide reductase MsrA; TAIR: AT5G61640.2 peptidemethionine sulfoxide reductase 1; Swiss-Prot: sp|P54152|MSRA_FRAAN Peptide methionine sulfoxide reductase; TrEMBL-Plants: tr|A0A067K443|A0A067K443_JATCU Uncharacterized protein; Found in the gene: LotjaGi1g1v0230600 LjG1.1_chr1 53964808 53970009 -
3 domain predictions
2 GO terms
LotjaGi4g1v0126800.1
n.a. Peptide methionine sulfoxide reductase MsrA; TAIR: AT2G18030.1 Peptide methionine sulfoxide reductase family protein; Swiss-Prot: sp|Q9SL43|MSRA5_ARATH Peptide methionine sulfoxide reductase A5; TrEMBL-Plants: tr|I1JCI6|I1JCI6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0126800 LjG1.1_chr4 18500719 18507047 -
3 domain predictions
2 GO terms
LotjaGi6g1v0160800.1
n.a. Peptide methionine sulfoxide reductase MsrA; TAIR: AT4G25130.1 peptide met sulfoxide reductase 4; Swiss-Prot: sp|Q9SEC2|MSRA_LACSA Peptide methionine sulfoxide reductase; TrEMBL-Plants: tr|I1JJ90|I1JJ90_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0160800 LjG1.1_chr6 44420732 44423822 -
3 domain predictions
2 GO terms
LotjaGi6g1v0160800.2
n.a. Peptide methionine sulfoxide reductase MsrA; TAIR: AT4G25130.1 peptide met sulfoxide reductase 4; Swiss-Prot: sp|Q9SEC2|MSRA_LACSA Peptide methionine sulfoxide reductase; TrEMBL-Plants: tr|I1JJ90|I1JJ90_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0160800 LjG1.1_chr6 44421071 44423709 -
3 domain predictions
2 GO terms