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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR036543
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 5 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.922s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi1g1v0714500.1
n.a. Guanylate-binding family protein; TAIR: AT2G38840.1 Guanylate-binding family protein; Swiss-Prot: sp|Q96PP9|GBP4_HUMAN Guanylate-binding protein 4; TrEMBL-Plants: tr|I1L889|I1L889_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0714500 LjG1.1_chr1 128259328 128269440 -
2 domain predictions
2 GO terms
LotjaGi1g1v0714500.2
n.a. Guanylate-binding family protein; TAIR: AT2G38840.1 Guanylate-binding family protein; Swiss-Prot: sp|Q96PP9|GBP4_HUMAN Guanylate-binding protein 4; TrEMBL-Plants: tr|I1L889|I1L889_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0714500 LjG1.1_chr1 128260007 128268046 -
2 domain predictions
2 GO terms
LotjaGi4g1v0062600.1
n.a. Guanylate-binding family protein; TAIR: AT5G46070.1 Guanylate-binding family protein; Swiss-Prot: sp|P32456|GBP2_HUMAN Guanylate-binding protein 2; TrEMBL-Plants: tr|V7CGT1|V7CGT1_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0062600 LjG1.1_chr4 7708852 7732843 -
2 domain predictions
2 GO terms
LotjaGi4g1v0062600.2
n.a. Guanylate-binding family protein; TAIR: AT5G46070.1 Guanylate-binding family protein; Swiss-Prot: sp|P32456|GBP2_HUMAN Guanylate-binding protein 2; TrEMBL-Plants: tr|A0A1J7G9U4|A0A1J7G9U4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0062600 LjG1.1_chr4 7725322 7732656 -
2 domain predictions
2 GO terms
LotjaGi5g1v0174300.1
n.a. Guanylate-binding family protein; TAIR: AT2G38840.1 Guanylate-binding family protein; Swiss-Prot: sp|Q96PP9|GBP4_HUMAN Guanylate-binding protein 4; TrEMBL-Plants: tr|A0A151S1L6|A0A151S1L6_CAJCA Guanylate-binding protein 4; Found in the gene: LotjaGi5g1v0174300 LjG1.1_chr5 44546378 44556256 +
2 domain predictions
2 GO terms