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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0062600 |
| Transcript ID | LotjaGi4g1v0062600.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Guanylate-binding family protein; TAIR: AT5G46070.1 Guanylate-binding family protein; Swiss-Prot: sp|P32456|GBP2_HUMAN Guanylate-binding protein 2; TrEMBL-Plants: tr|A0A1J7G9U4|A0A1J7G9U4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0062600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:7725322..7732656) extracted from Lotus japonicus Gifu genome v1.2.
ATGATGAACAAGTTTTTCAGCCGCGGCAGGGACAATGCCGCCGACACCTCACCGCCCTATACGGCGGCGACGTCGTCCGC TTCGTCTCCGGTCACAGGCCCCGCGAGGCCTATACGCCTTGTCTACTGCGATGAGAAGGGGAAGTTCCGGATGGATCCCG AAGCCGTCGCGACGCTGCAGCTTGTTAAGGAACCCATCGGGGTTGTTTCCGTCTGCGGTCGTGCTCGCCAGGGGAAGAGC TATATCTTGAACCAGGTCAGTGATTTTCTCGTTTTCCGTTTTGGAATTGAAATTTTATCGTTTTTTTTTCGAGTTTTAGG GTTTTGGGTTTCAGTGTCGCCTTTGGGAATTAGGGTTTTATTTTGACTTGGATGGTTCTTTAGTGGGATTACAGTAGAAT GCGTTCGTTTTTATGTTAAATTTCACTCCTTGTGACTATCATGTGCTTAGTTTTGATTCATGTTGGGATAAAAATCGTTT TTTTCCTCCTCTTTGGAAGTTTTCTCGTTAAGATTTTGAGAACACAATATGAACTATTCCAGCCCTGGTTGTTATCTGGT CTGGGACCGTTAGACCACCGGGGTAGTGGCTCCGTGATTCTTAGCGTGTCTGCTGTTGTGCTTGTTCATTTAGAACCAGT GTTGTCAAATCACGATCGTGGACCATTGCGGGGAGCCAAAAATTCGCTAAATAGCGGCGAATAGCGCGCTATAGTGGGCA ATAGCGGCGTCGCGATTAGCCAAAAATGCGCTACGCTCGCCGCTACAGCCGCTATTTGATAACACTGTTTAGAACAACGC GTTTCTGGATTATTATTTCCTTTTGGAACTCGTTTAAATTGGGTTGAGAAATGCTTGGCTAAATGAATTGTTTACTTGAC TGGGAACATTTTTGAGGTGTAAGTTATTTTTGAATTGTTGGCACTATCCCCGCCGGTCTTATATTAAGATAACTAACTGA AATTTTGTTATTATTGCAGCTCTTAGGAAAGAGTAGTGGATTTCAAGTAGCATCAACACATCGGCCATGTACCAAAGGGC TTTGGTTGTGGAGTACACCTTTGAAGAGGACTGCTCTGGACGGAACTGAGTACAGTCTCCTGCTATTAGACAGTGAAGGA ATAGATGCCTATGATCAAACGGTCAGCTTTTCAGTTTTCTAAGTTTTCAGATATATGCTTATTTTCTTGTGTTTATGTAG GTTGTCCATTTGTCAGGATTGGTTTGTTGTCTTACTCTGCAAATTTTTCTACTATACAGGGAACATACAGCACCCAGATA TTCTCACTGGCTGTCCTTTTGTCTAGCATGTTCGTTTATAATCAGGTTGGCTCCTATTAGGACCTATATTTTCGTAGTCA TAAATGCTTGTGTTATTACTTGAAGTTGTTCTTGACATCTTTGGTTTAACATTTCATGATCACTTTGGGGTCTGTTATAC AGCATAGAAATTTATTCTCTCTTCTTCCTTCTTTTCTGTATTTCTTGCTGAAATTTGAATGCTGATGTTGTTTCACTTCC AGATGGGTGGTATTGATGAGGCTGCCCTTGATCGTCTTTCTCTTGTCACCCAAATGACAAAGCACATTCGTGTTAGAGCA TCTGGAGGAAAGAGTTCTGCATCTGAACTAGGACAGTTTTCCCCAATTTTTGTTTGGCTCTTACGGGTAGGTTTTGAACC ATCTCAAATGTTGGGAAATAAGAAATAAAAGTCATGATATTGGAGTTTGATGGTACCTTAGTGGCTTAGCATACTTTGTG TAGTTTGTAATGTCATTCTTATCTTTATTTATCAATCTTCATGGCTGGCAGGACTTCTATTTGGACCTAACAGAAGATAA CAGAAAAATAACACCCCGTGACTATTTGGAACTTGCTTTGAGGCCTGTCCAAGGGAGTGGGAGAGATATAGCTGCTAAAA ATGAGGTAACTTTCTAATTCCTATTTTAGTTCTTGAGGAAGCAGTTGAGGTATATCATAAGTCTTAGAATATTTGATTCT TATTATGTTACGACTTAGGAGTATTGTTAGGTTAGTAGTCTTATTGGGCTCGGCTTGTACTAGTTGTTTACTTGATCTTT CTTGTATGGCTTGTGCTATCTTCGCTGAATTAATTCTTTAATTCAACAGTGAAGCTCATGAACGTCCTCGATACAAACAT AAAGTTCTGGCAGATGACCTAGGATGATTTGATAAATAATGCAAGGGAAAAGCCTTAGAATAAAATAACTAATATTCATA TTGTTTTAGTGAAAATGCAAGTTGTGTTGTTTTTCACATAGCAGGCTCTTTTATGGGTTATAGCAAAACATGACTGACAA ATGAATTAGTATCCTCTACAGTAGCACACTACTTCTACTATAGTTACCTTACAATTGCTTAAATTTACCTAGTAAAATAT CTGAAAATTGTCTCTTCTCCAGTACAAAATCATAAAAAGAGTAGTTATAGTTGGTCCCCTCCTACTCTGCATCAGTTCCC CCTTATTGAAAAAAAGTTGTTCCTTAAGTTTTGGGTTGGTGTTAGGAACCCAGGGAAGAGAATTTGAAATTTATTCACAC AATCGAGGGAAATTAATAATTTATTGAATACTGAGAATAAGAAAAAAAATTCTCCTCTAAAGTTTTCCCCTTTCACACAA ACTATAATTTTCTGATATGAGTCCTTCTATCCTTATCCCCCCTATTTATCTGACTGATATCACCTCTAACTAACTGATAA GAACCTTGGGAGAACCACACCACAAAAGCTAGCTGTTGTAGTTGGAGAGCCCAAGGCCTTATAAACCCCACATTGGAATC CCATACTTCCAATGTGGGACCCAAGTCCCATACCTTGCAATTGGGTCCTAACGCTAACTAACTACCTTGAAAGAGGAGTG CTACTAAGTACCAACACTCACTCTAACGCTCTTTTCAATACTCTTCATTGTATTGGTTAAAATTCATGTGGGTCCTACTA AATTGGAACTGGGACCGACATTTTTAGTGGACCGTACATGAATTTCAACCAATATAAGGGAGTGTGTTAAAATGAGTGTT GCTAGCATTTTTCTTTTTGAAAATACATTACTCAAAATTTTATAGCACATTAGAAATTGGAAAATGTTAACTTTATTTTC TGTGTGGAGTTGCTAATTTTCTGGCAATATCAATATATAGATTCGGGATTCTATTCGGGCTTTATTCCCAGATAGGGAAT GCTTCACCCTTGTGCGACCTTTGAACAACGAAAATGATCTGCAGCGACTGGACCAGATATCGGTGGGTAAATTATCAATT ACCATATCTTTTGCAGTCAATTTGTTGTTGCTATAAGGTTTTGATATTTTGATTTAAATATGCAGATGGACAAATTAAGA CCTGAATTTCGAGCTGGCCTTGATGCTTTGACCAAGTTTGTTTTTGAGAGAACAAGACCAAAGCAAGTTGGAGCGACTAT GATGACAGGGCCTGTATTGGTTGGTATTACTGAATCTTATCTGGATGCTATCAACCATGGTGCTGTGCCCTCAATTTCTT CCTCATGGCAGGTTAGTGTTATGTGAGGGAGGAACTTGTTTAGCATATGATATATCTCAAGTAAATAATTCTTTAGTATT ATAAACAGGTTTAAGGTTTTGGTTTGGCCACATGGCAATAAAATCCTATATATCTCAGGTTTAGAATTCTTTATTGTCTC GTTACATAATATAATTTTTAACCATTCATTGTCCTATTTTCCACTTTATCTAGACCGTAAATTGTCCTTGAATTTGATCT ATCAAGGAATTAAGATGATTGATGTAGCTTTGACATGAATGGAAATATTCATGTACGGCGGTGTTTTCTAGTAGAAGATA TCTTAATTTTTGATCTATAACAACTATACCTTTTCGCGCTAGGTGGGGTCGGTTTACAACTATTGGCATAATGCTCTGTC TCATACAACAATCTGTAATTAATAGAAATTTTTCCTCATCAATTGATCTTGTGAATCACATTCTACTTTGATGCCCCTTT TTATGAAGTATTACTCATTATTCTTTTCGTGTCTGTTGAAGTTGTTTATACCTACAAAAATATCATTGTTTTTCTTACCT AATTTATTTTATCTATTAATAGAAGAGACATGGTATTGTGTGGTGTTAGAGATAGTGTGGTTATCTCATACATGTAACAT GGACTGCTGTTGGGATTCAGTTAGTTAGTTGTTACTTGTTACTACCTCCGGTCCTATTTATAAGTGCCAAAAAACTACCT CACAGTTTAAGAAAAGAAGTTAAAGTAGTTAAATGTAATGAATTTGTTCTAAATTAATGTTAAACTTCCAAAATTACCCT TGTCATATTATGTGTAAGTGGCATTGGGAAGTGTAATTGGTGTTGATAATTGTGATGAGAGAAAATGTAACTAATGAGTA CACATTTTACTAGTTCAAAATTATTAAGGGCAATAGTGTCAAAATAATTAATGTGGCACAAGCATCAATTTGGTTCTTAT AAAAAGGACTGAGATAAACACCTCATTCGGTTCTTATAAATAGGACACGGAGGTATTACAACTTATTACTTCCTAGCTTC ACTCAGAAGCTTTGGCTCAATCTATACAATCCTCCCGATGTAATAACTTACATTCATAATGACAGAATCTCTGTTAACAT TTCAGTTTATTTTTCTGTGTATAGCTTCATATCATTCCGAAGTTTTCCGGCCTTGAACCTTGTGTTTCATTCCGACAGAT TTCATGTTTTCATTTCCACAGTTTTTCCGGTCTTACCGCTGCTGTGGTCCCTCTCTGGCAGGTTTCTTTCCTTTTTCTGG CCACCACCGCCGTTTTCCGATCACCACCGCTTCCCTCCGATGTCTTTTCTGGTCAACGAACCCGTTGTTGTAATCGTCAT CCCCAGATCGGAAACCCCTCAAGTACGGCAGCAAACCGCCACCCATTTATATGTGGTCAGGTTTACGCGCCCTATGGCCA CCAGAGCGTGGCGGTGCACGAGTGCTCCGCTACGGTGGCCGTTGACTACATCTAGCTCATTTCCACCTTCTCCTTCTAGA TCATCTCCTGTTTGGCACTTTTAAGGTTCGAGGTGTTCTAGATCTGAGATTCAAGCTTCGGTTTTGCTGTAAGCTGTTTC TATCTTCGGCAGCCGCTCCTCGAGTTAATTATATTTGTTATTTGTTACAAGCTGTGCATATGACATATATGCTTCAGCTT GAAGGGGAGTGTTAGATATCTTGTAAACAAATAAGATATCTTTTATTTATGGTTATTAGGTAACCTAATCATGTAATTAG GGAAGTGATCATGTAAACAGGGAAATAGAATATTTATAGGATATTTTGTAATTTTGGTGCCTTTATGGTGCCTATTATAA ATAATGACCCCCTTGTGTAGTTAAGACAGTCGGATTAAATCTAATATTGCCTCTCGGTTTCTCCTAATTTTACAATTATC ATAACTGTAAGTCGATGTTCTTGACTTTTGTTTGCTCATTGCTGGTATTTTTGTTGTTGGCTTTCAGAGTGTTGAAGAAG CTGAGTGCCGTAGGGCATATGATTCTGCTACTGAAGTTTATATGTCTTCTTTTGACCGTTCAATTCCACCTGAGGAGGTG AGTGGTATATCTGCATGAAGTAATTGTTGATTTTATATTTCTTTTCCTTTTTTCCCTAATTGCAATGGTTGCAGGTTGCT TTGAGGGAAGCACATGAACAAGCAGTTCAAAAGTCAACGGCTGCATTTAATGCTAGTGCTGTAGGAGTTGGTTCAGCTAG GAAGAAATATGAGGGCCTTCTTCAGAAATTCTTGAAAAAGGCTTTTGAGGTATTATATAATTGAAATTGTGAGTTGGATT AACTTATGAAACCTATAGTAAATTTTATAAGCATGTTGTTGTGAATGTAATCATTTGTTGGAACAGATATCTTGTTCTTT TTTGTGGTTGGGGTGGTAGGGGTCGGTTGGTGGCAGTCTCGGTAGTCATATTACATGCAATTTAATTTTACTTTTATTTT GAGTTATGTGTTTACTTGTGATGCCATTTGCTTATGATGATTGAAAATTGACCGTCTTCAGTAGGCACTAGGCAGCAGAC AAAATACTAAGGATTTTGTACAATATTTGTCTGCTGTGATTTCTACTTTTATTGATGTGTTTGATTCTCTAGTCTCTATT CTAGAACTGGGTAGCTTTTCTCATTATCGGGCTAATTATTATGTCAAAGGAGGGTTTCTGCCGGTCCATGACTTCATATT CCAAACCAAATGTGGTTGGTTGCCTCTTTATAACTTTGATGGTTGATATTGTTTTGCACTTCAAGTGGAATATGCCATAT GAGATGAATGAAGTGTTATTTTGCTGTACACACCATTATTATGCGTTTTATTCTGTTCCTGGCAGATTTGGAAGTTATGA GGCCAATATTCTATCCATATTTCTATGAGTTCAATATACTTGACCAGATTTGTATAGATTTACTCTTTTTTTTTTTTTTT AATTCCAGCAAATATCTTGCAGTGCTTGCATTAACAATTCATTGTTGAATAAAATATATTTTAGAACAATCCTAATTTTG CCATGGTGCGTAAACCTGTTATTGAATTTATGTAGAGTTCTGAACCATGAACTCTTGATTTAAAAAAAAAAAAATACCAA AACGAACAATAGTCAGTTTGTGTTTATTTAAGTCAATTCAGGGTGCGTTTGAGTAAGCATCTTAAAATTATCATATAGGA ACTTGTATCATAAACATATTCAACAGAAGTTGATTTTTATTAGTTTATCAAAAAAGCTTATTTGCTTAACCTCATAAAAG CTCAGAGGTGATTCATAAGCTATTTTTATATGTTTAATCAAACACCTATTAAATGCTTATGTCTTAAGATCAGCTAATAT GAGCTCCAGAAAAGTTATTTCAAATGCCACCTTGGTCATTAGACTCAAGTAGTTTTTATCTTCCTCAGTAAAGTTTTTTG TGTATGCCTTTTTTGGTTTGGTGGTATGGGGCAATGCAGTGTATGTCATGTTATTGTTTATTGGTCTACAGGATTATAAG AAGAATGCATTCATGGAGGCAGATCTGCAGTGCTCAAAGGCCATACAGTCTATGGAAAAGAGGCTGAGGGCAGCGTGTAA TGCCTCTGATGCAAAGATTGATAATGTTGCAAAGGTGATTGTTGAACACCAATAAAGCCTCTACTTCCTCTCTTTCCTTT TTTTTTGGTTTGGGGGAATATCATTAGAAGATAACTTGGCTGAAGTAATTTCCACTCAAAATTACTGTTGAATCTGATAA AATATTTCTTGTGTCTTATTCATTGATAAACTTGTACAATATATATAGATGTTAA
CDS sequence (LotjaGi4g1v0062600.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGAACAAGTTTTTCAGCCGCGGCAGGGACAATGCCGCCGACACCTCACCGCCCTATACGGCGGCGACGTCGTCCGC TTCGTCTCCGGTCACAGGCCCCGCGAGGCCTATACGCCTTGTCTACTGCGATGAGAAGGGGAAGTTCCGGATGGATCCCG AAGCCGTCGCGACGCTGCAGCTTGTTAAGGAACCCATCGGGGTTGTTTCCGTCTGCGGTCGTGCTCGCCAGGGGAAGAGC TATATCTTGAACCAGCTCTTAGGAAAGAGTAGTGGATTTCAAGTAGCATCAACACATCGGCCATGTACCAAAGGGCTTTG GTTGTGGAGTACACCTTTGAAGAGGACTGCTCTGGACGGAACTGAGTACAGTCTCCTGCTATTAGACAGTGAAGGAATAG ATGCCTATGATCAAACGGGAACATACAGCACCCAGATATTCTCACTGGCTGTCCTTTTGTCTAGCATGTTCGTTTATAAT CAGATGGGTGGTATTGATGAGGCTGCCCTTGATCGTCTTTCTCTTGTCACCCAAATGACAAAGCACATTCGTGTTAGAGC ATCTGGAGGAAAGAGTTCTGCATCTGAACTAGGACAGTTTTCCCCAATTTTTGTTTGGCTCTTACGGGACTTCTATTTGG ACCTAACAGAAGATAACAGAAAAATAACACCCCGTGACTATTTGGAACTTGCTTTGAGGCCTGTCCAAGGGAGTGGGAGA GATATAGCTGCTAAAAATGAGATTCGGGATTCTATTCGGGCTTTATTCCCAGATAGGGAATGCTTCACCCTTGTGCGACC TTTGAACAACGAAAATGATCTGCAGCGACTGGACCAGATATCGATGGACAAATTAAGACCTGAATTTCGAGCTGGCCTTG ATGCTTTGACCAAGTTTGTTTTTGAGAGAACAAGACCAAAGCAAGTTGGAGCGACTATGATGACAGGGCCTGTATTGGTT GGTATTACTGAATCTTATCTGGATGCTATCAACCATGGTGCTGTGCCCTCAATTTCTTCCTCATGGCAGAGTGTTGAAGA AGCTGAGTGCCGTAGGGCATATGATTCTGCTACTGAAGTTTATATGTCTTCTTTTGACCGTTCAATTCCACCTGAGGAGT GGTTGCAGGTTGCTTTGAGGGAAGCACATGAACAAGCAGTTCAAAAGTCAACGGCTGCATTTAATGCTAGTGCTGATTAT AAGAAGAATGCATTCATGGAGGCAGATCTGCAGTGCTCAAAGGCCATACAGTCTATGGAAAAGAGGCTGAGGGCAGCGTG TAATGCCTCTGATGCAAAGATTGATAATGTTGCAAAGATAACTTGGCTGAAGTAA
Protein sequence (LotjaGi4g1v0062600.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMNKFFSRGRDNAADTSPPYTAATSSASSPVTGPARPIRLVYCDEKGKFRMDPEAVATLQLVKEPIGVVSVCGRARQGKS YILNQLLGKSSGFQVASTHRPCTKGLWLWSTPLKRTALDGTEYSLLLLDSEGIDAYDQTGTYSTQIFSLAVLLSSMFVYN QMGGIDEAALDRLSLVTQMTKHIRVRASGGKSSASELGQFSPIFVWLLRDFYLDLTEDNRKITPRDYLELALRPVQGSGR DIAAKNEIRDSIRALFPDRECFTLVRPLNNENDLQRLDQISMDKLRPEFRAGLDALTKFVFERTRPKQVGATMMTGPVLV GITESYLDAINHGAVPSISSSWQSVEEAECRRAYDSATEVYMSSFDRSIPPEEWLQVALREAHEQAVQKSTAAFNASADY KKNAFMEADLQCSKAIQSMEKRLRAACNASDAKIDNVAKITWLK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 32 | 32 | - | – | |
| PANTHER | 16 | 398 | 383 | 3.7E-262 | – | |
| PANTHER | 16 | 398 | 383 | 3.7E-262 | – | |
| MobiDBLite | 17 | 32 | 16 | - | – | |
| Gene3D | 32 | 310 | 279 | 9.7E-96 | – | |
| SUPERFAMILY | 36 | 308 | 273 | 1.82E-48 | ||
| Pfam | 47 | 305 | 259 | 4.5E-65 | ||
| CDD | 60 | 303 | 244 | 6.3459E-66 | – | |
| ProSiteProfiles | 63 | 305 | 243 | 66.856 | ||
| Pfam | 310 | 398 | 89 | 2.2E-21 | ||
| Gene3D | 311 | 434 | 124 | 1.6E-12 | – | |
| SUPERFAMILY | 312 | 431 | 120 | 1.57E-26 | ||
| PANTHER | 398 | 440 | 43 | 3.7E-262 | – | |
| PANTHER | 398 | 440 | 43 | 3.7E-262 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | GTPase activity | Catalysis of the reaction: GTP + H2O = GDP + phosphate. | ||
| Molecular function | GTP binding | Interacting selectively and non-covalently with GTP, guanosine triphosphate. |
Expression pattern of LotjaGi4g1v0062600.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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