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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR036546
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 9 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.423s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi3g1v0006200.1
n.a. Mediator of RNA polymerase II transcription subunit 15a, putative; TAIR: AT2G10440.2 mediator of RNA polymerase II transcription subunit; Swiss-Prot: sp|Q9SHV7|MD15C_ARATH Probable mediator of RNA polymerase II transcription subunit 15c; TrEMBL-Plants: tr|A0A0S3SF80|A0A0S3SF80_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0006200 LjG1.1_chr3 776752 787124 +
2 domain predictions
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LotjaGi3g1v0006200.2
n.a. Mediator of RNA polymerase II transcription subunit 15a, putative; TAIR: AT2G10440.2 mediator of RNA polymerase II transcription subunit; Swiss-Prot: sp|Q9SHV7|MD15C_ARATH Probable mediator of RNA polymerase II transcription subunit 15c; TrEMBL-Plants: tr|A0A0S3SF80|A0A0S3SF80_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0006200 LjG1.1_chr3 776787 787053 +
2 domain predictions
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LotjaGi3g1v0006200.3
n.a. Mediator of RNA polymerase II transcription subunit 15a, putative; TAIR: AT2G10440.2 mediator of RNA polymerase II transcription subunit; Swiss-Prot: sp|Q9SHV7|MD15C_ARATH Probable mediator of RNA polymerase II transcription subunit 15c; TrEMBL-Plants: tr|A0A0S3SF80|A0A0S3SF80_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0006200 LjG1.1_chr3 776790 787053 +
2 domain predictions
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LotjaGi3g1v0006200.4
n.a. Mediator of RNA polymerase II transcription subunit 15a, putative; TAIR: AT1G15780.3 mediator of RNA polymerase II transcription subunit 15a-like protein; Swiss-Prot: sp|F4I171|MD15A_ARATH Mediator of RNA polymerase II transcription subunit 15a; TrEMBL-Plants: tr|A0A0S3SF80|A0A0S3SF80_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0006200 LjG1.1_chr3 777632 785650 +
2 domain predictions
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LotjaGi3g1v0006200.5
n.a. Mediator of RNA polymerase II transcription subunit 15a, putative; TAIR: AT2G10440.2 mediator of RNA polymerase II transcription subunit; Swiss-Prot: sp|Q9SHV7|MD15C_ARATH Probable mediator of RNA polymerase II transcription subunit 15c; TrEMBL-Plants: tr|A0A0S3SF80|A0A0S3SF80_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0006200 LjG1.1_chr3 777632 786465 +
2 domain predictions
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LotjaGi3g1v0006200.6
n.a. Mediator of RNA polymerase II transcription subunit 15a, putative; TAIR: AT1G15780.1 mediator of RNA polymerase II transcription subunit 15a-like protein; Swiss-Prot: sp|F4I171|MD15A_ARATH Mediator of RNA polymerase II transcription subunit 15a; TrEMBL-Plants: tr|G7IM96|G7IM96_MEDTR Transcription cofactor, putative; Found in the gene: LotjaGi3g1v0006200 LjG1.1_chr3 777633 778490 +
2 domain predictions
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LotjaGi3g1v0006200.7
n.a. Mediator of RNA polymerase II transcription subunit 15a, putative; TAIR: AT1G15780.1 mediator of RNA polymerase II transcription subunit 15a-like protein; Swiss-Prot: sp|F4I171|MD15A_ARATH Mediator of RNA polymerase II transcription subunit 15a; TrEMBL-Plants: tr|A0A0S3SF80|A0A0S3SF80_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0006200 LjG1.1_chr3 778129 786465 +
2 domain predictions
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LotjaGi3g1v0312400_LC.1
n.a. Mediator of RNA polymerase II transcription subunit 15a, putative; TAIR: AT1G15780.1 mediator of RNA polymerase II transcription subunit 15a-like protein; Swiss-Prot: sp|F4I171|MD15A_ARATH Mediator of RNA polymerase II transcription subunit 15a; TrEMBL-Plants: tr|K7M0K0|K7M0K0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0312400_LC LjG1.1_chr3 66070508 66074080 -
2 domain predictions
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LotjaGi3g1v0353400.1
n.a. Mediator of RNA polymerase II transcription subunit 15a, putative; TAIR: AT1G15780.1 mediator of RNA polymerase II transcription subunit 15a-like protein; Swiss-Prot: sp|F4I171|MD15A_ARATH Mediator of RNA polymerase II transcription subunit 15a; TrEMBL-Plants: tr|K7L7Z4|K7L7Z4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0353400 LjG1.1_chr3 73401575 73414125 +
2 domain predictions
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