Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0006200 |
| Transcript ID | LotjaGi3g1v0006200.1 |
| Related isoforms 6 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Mediator of RNA polymerase II transcription subunit 15a, putative; TAIR: AT2G10440.2 mediator of RNA polymerase II transcription subunit; Swiss-Prot: sp|Q9SHV7|MD15C_ARATH Probable mediator of RNA polymerase II transcription subunit 15c; TrEMBL-Plants: tr|A0A0S3SF80|A0A0S3SF80_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0006200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:776752..787124) extracted from Lotus japonicus Gifu genome v1.2.
CATGTTGGTCTTATTAGCTGAACCATAATTGTTTTACCTGCAAGCTCGCCGAGTCAGACACGCAACCGCAAACCACTCCT CACGCCACCACCGAAATCCTCGTCAACCACCGCCGTCAGGTTCCGATTCTCTCACTCTTCATCTCTCTCTCTCTCTCTAT CTCCTCCTCATCTGTTCATTGCTTGTTGATCTTCTTGCTTCGATTGACGATGCTTTCAATTTCAGCGGCAGGTGTTTCGA ATCATCATCTTGATGCAATAGGAATCGACGCATTCAGAGGTAAACATCATCATCTGTTGAAGCCGAATTCGGAGTTACTC TTCGATAGATATTGCAATTGGGGCAACGTTTTTTTTGTGCGATTTTGGGGTTTTACAAACTTTTCAATTTTTGGAAGCAT TGAGATTAGTAAAATTCGCATTCTCATTGATCCCTAACCCTTTGTTTGTTGATTGAATGATATTTGGTTTGTTTAGCTTC TACTTTTTGAGATTTTTTTTTCCTCCTTTTGGAAATCCTCAATCGATTTTAGGGCATGTTAACAAATTGTGTTTTAAACT GTAAGGATCCTCAATGGATTTTAGGGCATGTTAACAATTTCCCCCCCTTTCTTTTAGGGTTTTTTGTTGTTGTTGTTGTG TGCAATGAAGATATGTCAAGGGTAATGTTGCTTGTAGTAAACCACTACAAGCCTGCATAGAGTATAAGCTGAAGTTAATT GATGATTTTATAGTTGGCCAGTTTGGCTCGGTGCGAAGTCAATAATTGCTATTCATTGTCTGCTTAAATTTTCACTGCAC ACACTCTTAATACCTTATTTACAGAGTTTGATTTGAGAAGAATGATCTTATGTGTTGGTGTTTCAGTAGATATAAATTTG ATGGATAACAACAATAATTGGAGGCCTAATCAAGGCGCTGAACCCAATATGGATACTAGTGATTGGAGAGGTCTTCTGCA GCCTGAGTCACGCCAAAGAATTGTCAACAAAATGTAAGCTTCAGCTTTAATATTGTGTCTCCGATGTGATTTGTAGTTTT TTAATACTGCTGCAGATCAACAGAACAGTTAAATATAAATAATTGATTCATATATTGGCAACATTTCGTTGACGATCCTG GTATTTTTTTCTCCAAGAAATGAAAAATAAATGTATGGTTGAAGACTATAAACAAACACACAGCACCTTGTGGTTGTCTA ATGCATATAAACTATGAAACTTGTGCTCTAATATATATTTGACAGGTGAAAAACAATAATCAAATCTGTTCATTTTCCTT TCAAACAAATGTTTATTTAAATTTTTGCTGAATACCAATTTTTTCATTTTATTTGTATTATTTAACTATTAAACCGCTTT TTTTCAATTTTTGTAGAATGGACACGTTAAAAAGACATCTTCCTGTTTCTGGTCAAGAGGGATTGCAAGAACTTCGGAAG ATTGCTCAAAGGTTTGAAGAGAAGATTTTTACTGCTGCAACAAGCCAGGTATATATCTAATTGGAATCCTCATGATTTTC AATTTATTATTACCTATACAAACACGCACAATATGGAAGATTGATGATCTAATGTTGTATTTCCCTAATTTCAGTCTGAT TATCTACGGAAAATATCTTTGAAGATGCTTACGATGGAGACTAAATCCCAGGGCACTATGGCCAACAATATCCAATCGAA TCAAGTTGGTCCTAGCAGTAAACCTCCCGATCCAGGTTAGTATATAAGAGAGAGTATAATACTCCTTGTTTCATGTCTTT CAGCTTTAGCTGTTGGGAGTTGGGACTATACCGAGTCCTATTGCTATGAAATATCATTAACATTTTAGTTTTTCCTCTGC TGGTCTTACATATGGTCATTGTCCTTTGTCTTCTATCTTTATTTCTTTTAAAATTTCTGGATTAAAATCATTCTTGTGTT GTTAACTACTCATTTTAATCTGGCTTTGTATCATAAATTTTATTTCTTCCTCTGACTTGGACAATCATTTTTTTTCTTCA TAGGACTTGTCATGCAGCCTCAAGGGCAGCAACATCCTATTCCTGTGGCTAATCAGCCCCAGTCACGCCAACAGCTTCTG TCTCAGAACATTCAAAACAACATTGCATCTCAACCTAACTTACCTCCTGTATCTAGTCTAGGCCAGACTCCCATTCAGAA TGTTGGTCAGAATTCCAACATTCAGAACATAGCTGGACAGAACTCAGTGGGGAGCACTATTGGCCAGAATTCCAACATGC AAAATATTTTTACTGGTTCCCAGAGACAAATGCAAGCAAGGCAGCAGGTTGTTTCCCAACAACAACAACAGCCACCACAG AATCCCCAGCAGTATCTGTACCAGCAACAACTTATGAGGCAGAAGCTTCAGCAGCAGCAACAACAGCAACAACAACAGCA GCAACAGCAACAGCAACAGCAACAGCAACAGCAACAGCAACAGCAACAGCAGAACCTTCTACAATCAAATCAGTTGCAGT CTTCTCAGCAATCTGTTATGCAGCAGCCTTCCATTATTCAAACATCTTCTCTATCTAGTGTTCAGCACAATCAGCAATCA AATAATGTTCAACAGTCAACACAGTCCATGCTTCAACAACACCCGCAAGTTATCAGGCAACAACAGACTTCTATGATTCA TCAGCAACAAACACCAATGAATCAACAGTCAATATTGCCTCCCCAACAGCAGCAGCAGCAACAACAGCTTATGGGGCCGC AGGCAAATGCAACAAACATCCAACATACGCAGATGCTTGGGTCACAAAATAATGTTGGTGATTTGCAGCAACCACAGAGG TTACTTGCGCAGCAGAATAATCTTTCAAATCTGCAGCAGCAGCAGCAGCAGTTAATAAATCAGCAAAATAACCTATCAAA TATACATCAACAGTTGGGGAATAATGTCCCCGGGTTACAGCCACAGCAGGTCCTTGGATCTCAATCTGGCAACTCGGGCA TGCAGACAAGCCAGCACTCTGCACACGTGCTACAACAATCGAAGCCGCAGCAACCACAGCAAAATGCATCAAATTTGTTA CAATCTCAAATGCAGCAGTCACAGCCACAGGCTCCACAGCAGCAATTGATGCCACAGATTCAATCTCAACCTGCGCAATT GCAACAGCAATTGGGTTTACAACAGCAGCCAAATCCATTGCAACGAGATATGCAGCAAAGGCTTCAGGCATCAGGTTCCT TACTTCAACAACAAAGTGTTCTAGATCAACAAAAGCAGTTATATCAGTCACAAAGACCCCTTCCAGAAACTTCATCAAGT ATGTAAAATTGTAACTATGTGTTTTTTGTCTTTATCTTTTATCATTAATATCTCTAAAGTTGTCATATGTGGAATGGAAG AGCTAGCTCTAATATAAAACTATATTTGAATCATGTCTCAGACAAATAGGCGGAGTAACTTTGAAAACACAACTAGCATC GAAATAAAATCTTATTCAAAATACATAATAGATGTAAGTCCGTTAGAAGGTCTAAGTCATGTCTCTCCCAAAAATAACGA TGGTCTAAGCTCTAATAAAACAAAGGCACAAGTTGAAGTTACAAATCAAAATATTAAAACGCTAAAAGATTAGCATTTCA GTGAATTGCAATTTCCAAGGGCTGGGTACCGAAATGTTACAATCCCTGTGATTCTACGTCCCTGCACAACCTCAGCAGAA TGAGTTTTCTTTGGGTATCAAGATACATCCTGCCTCTCAAACATGTAGTATCACTAGGTTTTACTGGAGTTCTGTGGTGA TGGACATGTTATATACATATGTTAACTCAAGTTTATGATTATTGCACAAGATCTTTACTTCTCAGCCTATAGACCGGTAT AACCCCCGAGTCTTTAGAAAAGTTAGGATGTTACAATATCTCATAAATGTATTGTTTGGAATGGATTTGATAGAACAATG TTCTATAAGTTCATTTGAAATTACTTCCCTATTCTAACATTCTCTCTTTGGAAAAAAGAAGCAAATGTCCTCATTTTTTA GCCTTGTATGCTTATGTGTGCATCATATAATATCTCTTGTAGCTTCTATGGATTCTACGGCACAGACTGGACAGCCGAAT GGGGGTGATTGGCAAGAAGAAGTGTATCAAAAGGTAATATGTCAAACAAACCCTAATATAATGTAATGAAGATTGATGAT GTTTATTCTGAGCAGTTTCCTTAATAGTAAGAACATGGAACTTTTACTTGTCTTAAAGGAAAAGTTATGGAATTGGAAAC TCTTCTTAAATGCACACTGTTCATATTGATGATAATCATCATTTGCATGATACTTAGAAAGATTTGTGCTGTAATGGCAA TTGGCAAAAACCTCTAGTGTTTTACCCTGAAGGTATATTTATTTTCTTTTTTTGGTTTTCTGTCTTGAGTGAATTTCTTT TCTAACTTTGTCTCAATCCTCCATTAATTGCTGGCATCAAGTAATATTTGCTGTAATTAATAAATTGGTTTTGTGCTGAT ATTGATGGTGTTGCTTTGGTGAGTTTTGAAGTTTTCAATTCAATATTCAAAGTCATGATACGGAAATGCATGGTTAGCTT CTTCTCAATTTAAGCATGCAAGTGAAACTTGCTATTTATGAATTATGACGCTTTACAAAAGGAAACAAAATACTGTTTTC CATTTTGTATAAATTAATGCAACAATGATATTCATCTACTTGCGCGAGAGATTTCAACGTTTCTAATGTGATTATTTGAT TCTGATGATTTTAACCTACAGATCAAAACCATGAAAGAAAATTACCTGCCTGAGTTGAATGAGATGTACCAGAAAATTGC TACTAAACTTCAGCAGGTATGTAGCAACTTTTTAATAGCTGCTATGGGTAAAGAAGCCTTTTTCCATCACAATTTACAAA TATCCTGGAAAAGTCTGAAGATTGCAATGTGTGCTAAGCCCTTTATTGTTTTCGTGTTTCCTTTTAACTTATTTTTTCCT AGTTTAACATTTTATTCTTTTTTCTCTGTCAGCACGATTCCCTTGCCCAACAATCAAAGTCAGATCAGCTTGAAAAGCTT AAGGTATTTAAAATGATGTTGGAGCGGATTATATCATTCCTCCAGGTGTCCAAGAGCAACATAGCACCTAGTTTCAAGGA AAAACTGGGTTCATACGAGAAGCAGATTATAAATTTCATAAATACAAATAGACCTAGAAAAGGCATGTCTTCACTGCAGC ATCCAGGAAATCTTCCCCCACATCATATGCATTCCATGTCACAGTCACAACCCCAAGTTACTCAAGTTCAGTCTCTTGAA AATCAAATGAACTCTCAGATGCAAACAACAAATATGCAAGGTTCTGTAGCAACGATGCAGCAGAATAATATGACAAGCAT GCAGCATTCTCTGTCTGGTGTATCTACATCGCAGCAGAGTATGATGAATTCAATGCAGCCCAGTACCAATTTAGATTCAG GACAAGGAAATGCTATGAACTCCCTGCAACAGGTTCCAGCGAGCTCCCTTCAACAAAACCCTGTTACTGCTCCTCAACAA ACTAATGTTAACTCCTTATCTTCACAAGGTGGGGTTAATTTGATCCAACCAAATCTTAATCCCCTTCAGCCAGGTTCTGG TATGCTTCAACACCAGCAACTAAAACAACAACAGGAACAACAGATGTTGCAGAGTCAACAATTCAAACAACAATATCAGC GACAATTAATGCAGAGGCAGCAGATGCTACAGCAACAGCAGCAGCAGCAACAACAGCAGCAGCAGCAGTTACACCAGACA ACAAAGCAACAGTTGCCTGCACAATTGCAGACACATCAAATGCAACAGCTTCACCAAATGAATGATGTAAAGGACATAAA TATGAGGCAAGGAATTGGTGTTAAGCCAGGGGTCTTCCAGCAACATCTTGCTTCCAGTCAACGCTCAGCTTATCCCCATC AACAATTGAAACAAGGGAGTCCTTTTCCGGTTTCTTCACCCCAACTCCTCCAGGCAACATCTCCTCAGATTCCACAACAT TCGTCGCCCCAGGTTGACCAGCAAAATCACCACCCATCTCTCACAAAAGTTGCTACTCCTTCTGCTAACTCACCATTTGG ACTCCCCACTCCTTCACCTCCCTTGGCTCCATCTCCTATGCCAGGAGATTCTGAAAAGCCTATTTCTGGTGTTTCATCAA TGACACATGCTGCAAATATTGGACATCAACAAACAGGGAGTGCAGCCGCAGCTGCTCAATCCCTTGCCATTGGAACTCCT GGAATATCTGCCTCTCCTCTACTGGCAGAGTTCAGTGGTCCAGATGGTGTTCATGGTAATTCTTTTCCACCAACATCAGG AAAGTCAACTGTTTCTGAGCAGCCTCTTGAGCGCCTAATTAAAGCGGTTAGTCTAGTTGATCTTAAGCTTTCCTGACCTG TGTTAGTGATCTTAGTTATGACAAGAAATTTATGTGAAGGTTTCCATAGCTATTCCACTGTGTTAATTTTGGAGTTGTAG ATGACAATTTATGTGTAATGTTGATTCCAGGTGAAATCATTGACACCTAACGCATTAAGTGCTGCTGTCAGTGATATTGG TTCAGTTGTCAGCATGAACGATAGGATAGCAGGATCGGCTCCTGGTAATGGATCCAGAGCCGCTGTTGGTGAAGATTTGG TTGCCATGACCAATTGTCGCCTTCAGGCTAGGAATTTTGTCAACCAAGATGGTGCCAATGGAACCAGGAGGATGAAACGC TGCACCAATGCTACACCCTTGAATGTTGTATCATCTGCTGGTAGCATGAACGACAGTATCAGGCAGTTAGAAGCTTCTGA TTTGGAGTCAACTGCAACATCTAGTATCAAGAAGCCTAGGATTCAGGTACTAATTACTTTTCAATTGTTACATTTTATTT CATAACTGATCATCTATCATTTACTGTCAGTTATATTTTTTTGGCTTGCCTGTGCAATTCATTAATAGGTGTCAACGCAT GGATCATACATGCACCAATACATTATGGAAATTTTTATGTTAACACCCAAAATCCACCCACACCTAGAGATAGATAGGAA GATAAGAGAGACAAATAAATAATAGGATAACTGATGTGACAGGAATAGAAGAGAGTGATAGGAATAGAGTGGGGTGTGAA TATATGAAAACCCTACAATGTACAATACTATTTCACCTTTTTCATTTACATAGAATGCATTTGTTGCCACACAAAGTGTA AGTGCAATTTAATATTTCTGACCGTTGATATCAGTATCTCACGATAGTACCATTCGTATCTCGATGCAATAGAAATTCTT GAGGCAACGATGTATTACGTAGGGTGAACTTGAATCTCAATCTCTATCTCCGAGTTGTAATGGGATATTGTAATAGGATA CACTGCAAGGTGCAGCATCCCTCATATATATAATACTAGGTTAAGAGTAGTACAGTATGTAGTACAAAGTACGGACTTAG AGTACATATGGGCCAGGCCCATAGACTCTATGTCTAACCCTAACTCTTAACATAATCCATGGCTAACATAATCCTTATCG CTAACAGAGCTGAATCACACAATTCACGATTCACTGCTGAATCTAATGATTCAAAGTTGCGAGCATGTTTCACTTCAGTT AGGTCGTGTTGTGTGACAAAAAGATTCAGCCTGAAAAAATGCTGCAAGTTCAATTTAGAAGAGTGTAGAAAGGCACAATT TCATATTCTCATTTATAGAGTGAAACATATCATTTATGAAATTGCACTCGAGATTTCCAGCTACTGGAATCATCCAGACT AAATTAGAGATTTTATACCTGAACTTAAGGACAATCAGTGTAGCAGACAAGATTACCAGAATGGTACTAAGGGAATGGAG TATACACTTGGTTGGAAAGATGAACTTATTCACACTTTTATTTTACAAATGCGGATGTGCAATTATCTGTATTTTATGTG TGTACCAAAGGAGAACAAATATTTTTCACCGTTGATTATATTTAGTCAGGACATTTCTGTGGTTGTTAATGTATCCAGTA AAAATATTGATTTAGGAATTGCGATTTTCTCTCTTGATGTTAAATGGACCAATTCAATTAGTATACCTAAATTTAAATTT ACTAAATGATATAATAAAATAATAACAGTAAACCAATCAAAAAAAAAACCACTGTGATAGTACTATGGCTGTACAAGCGT GCAACAAGCCAACAACAGCAATTTTGTTAGTAGTTAGACTGATTGATGTTGTTAGTTATACTGATTATTTTGTCTCATTG CTATTGCTATTGAAATTCATTTCATTAGAGCATGATGATTCATCAGATAATAGGTTTTACAATAATTCCAAAGTTAGCAT TGTGAGGAACCACCTTATATATGGATTTGCTTGAGACAGTTTTTGATTGCTGATAAGAATATGTAACTTGCATGGCAGGC TAATCATGCCCTTTTGGAAGAAATTAGGGAGGTTAATCAGCGACTTATCGACACAGTAGTTGACATAAGTGATGAAGAAG TTGATCCAACTGCAGCTGCTGCTGCTGCTGAAGGTGCAGAAGGGACCATTGTCAAATGTTCTTACTGTGCTGTGGCTCTC AGTCCAAGCCTAAAATCCCAATATGCGTCAGCACAGATGGTGGGTTCTTAGCACTCTTAAACCTTATACTTATTAACCTT TTTTTCTCCTTTTCGTCACAATTTTTGTCCTTATCTGTGTATGCAGTCACCAATTCAACCCCTGCGCATGCTTGTCCCTA CAAATTATCCTACCTGTTCCCCCATATTCCTTGACAAGTTTCCAGTTGAATCCAGGTGAGAGACTGAGCATTTTGGCATC TCTGTTATTTCTACTCCAAAGAAAAAAAAATTATTCTTTCAGCAAACCACTAGTTATCATAAGTTAGTATGTTTGCTTCC CAAAAGAGGAGATATCTAAGGGCTTATTTGGCTTGTGAATTTTTTTTTGTGTGCTTTCTATTTCAATTTTTAGCTGCAAA AATGACATCGTTTTTTACTGTTACTGTTTTCCAATATTTTCTAAAAAAAAAGGGGTGAAAATAACTATTTATTAGTCTAC CCGTTTTGAATAAATATTTAAAAACAGGAAAAGATGTGAAATTAACATAATATTTTATAATTTAATTTAATACGAAAACA GCAAATGGAAACAAGAAATGTTTCGATAGGTCTTAAACTCTTAAGGATCCGTTTGATTTACTGTTCGAAAGTGAAAATGG GAGCTTACTAATTCAACAAAATGTGTCCCGAGATGTGTTATTTTTCAGTTTTCATACTCTCTAATGGTAAAACAAATAGA CTCAAATGTTTTCATCTTGCAAGCTTTCAGTGATTGAGTTATGAGTTATGACTCGTAACTTCTTTCACACATGCAACATG TCTTTGCTTTTATTGTATATGACTGACTAAAGTAGTTAAGGCTGGTAGGTGCCCCATATTATTTCCCCTCATCTTCATAG TTGATCTTAAATTTGCCGAGAGTTCTTGTGTTTCTAATTAAATGAAGTGGCACTGGATATTTCTTTCAGTATGGAGAACG AAGATCTTTCGGCGAAAGCAAAGTCCAAGTTCAGCATATCCCTGCGAAGTTTATCACAACCTATGTCCCTTGGGGCGATA GCAAGGACTTGGGATGTTTGTGCTCGCACTGTTATTTCTGAGTATGCACAGCAGAGCGGCGGAGGGACTTTCAGCTCTAA GTATGGGACTTGGGAGGATTGCTTGGCCATATGATCATCACTACTTGCTTTCCATGTCAACCTTTTTTTTCGTTTTTTTG TGTAAATTTTTCAATAGCTTCTGTTAATTATTGGGTGTTCAGTTTAGGGTTGTAGATGGAAACATTTTAAGTGCTTGCAT GATGCAAGTTGTCCTATTTTATGCACTTGTCTAGTGCATAGTTGCGATATGTGCTATTGCCTAAGACAATCTGTGTAGTT TATTTGGTGTTTAAATCTGATTGCCCTTTCTCAATGCCTTGATCATGACTAGATAGTATTAATCATTTAGGTGTGTCATT TGTTTTTTAATTGAAAATACAAGTGTGAATCACGTCAGCCTCATTAAATGATGTGTGGACTATACAACATCATGCTTTAC CATACACGCAAGTAACTCAGATTCTAGTGATGATTAAAATCAAACAATTTAGAAGTTGGAAGGACCAAAATGCAACTTTT GTCCAATGATAAAGTTAGAGGAACCAAGAACATATTTAGCCTATATATTAATTATGTGATGTTTAACATCAATCGTAATT GGGCATGAAGGCTTGTGGTAGATTGTGCCGCTCGTTTACTATTTACTGAGAGGCCTCTGCTTTAATATATTTTTTAACTA CTCTTTTCATTTTCTTGGTTTTTGCTTTTTTCTTTTGGTATTTTACATTGAAA
CDS sequence (LotjaGi3g1v0006200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATAACAACAATAATTGGAGGCCTAATCAAGGCGCTGAACCCAATATGGATACTAGTGATTGGAGAGGTCTTCTGCA GCCTGAGTCACGCCAAAGAATTGTCAACAAAATAATGGACACGTTAAAAAGACATCTTCCTGTTTCTGGTCAAGAGGGAT TGCAAGAACTTCGGAAGATTGCTCAAAGGTTTGAAGAGAAGATTTTTACTGCTGCAACAAGCCAGTCTGATTATCTACGG AAAATATCTTTGAAGATGCTTACGATGGAGACTAAATCCCAGGGCACTATGGCCAACAATATCCAATCGAATCAAGTTGG TCCTAGCAGTAAACCTCCCGATCCAGGACTTGTCATGCAGCCTCAAGGGCAGCAACATCCTATTCCTGTGGCTAATCAGC CCCAGTCACGCCAACAGCTTCTGTCTCAGAACATTCAAAACAACATTGCATCTCAACCTAACTTACCTCCTGTATCTAGT CTAGGCCAGACTCCCATTCAGAATGTTGGTCAGAATTCCAACATTCAGAACATAGCTGGACAGAACTCAGTGGGGAGCAC TATTGGCCAGAATTCCAACATGCAAAATATTTTTACTGGTTCCCAGAGACAAATGCAAGCAAGGCAGCAGGTTGTTTCCC AACAACAACAACAGCCACCACAGAATCCCCAGCAGTATCTGTACCAGCAACAACTTATGAGGCAGAAGCTTCAGCAGCAG CAACAACAGCAACAACAACAGCAGCAACAGCAACAGCAACAGCAACAGCAACAGCAACAGCAACAGCAACAGCAGAACCT TCTACAATCAAATCAGTTGCAGTCTTCTCAGCAATCTGTTATGCAGCAGCCTTCCATTATTCAAACATCTTCTCTATCTA GTGTTCAGCACAATCAGCAATCAAATAATGTTCAACAGTCAACACAGTCCATGCTTCAACAACACCCGCAAGTTATCAGG CAACAACAGACTTCTATGATTCATCAGCAACAAACACCAATGAATCAACAGTCAATATTGCCTCCCCAACAGCAGCAGCA GCAACAACAGCTTATGGGGCCGCAGGCAAATGCAACAAACATCCAACATACGCAGATGCTTGGGTCACAAAATAATGTTG GTGATTTGCAGCAACCACAGAGGTTACTTGCGCAGCAGAATAATCTTTCAAATCTGCAGCAGCAGCAGCAGCAGTTAATA AATCAGCAAAATAACCTATCAAATATACATCAACAGTTGGGGAATAATGTCCCCGGGTTACAGCCACAGCAGGTCCTTGG ATCTCAATCTGGCAACTCGGGCATGCAGACAAGCCAGCACTCTGCACACGTGCTACAACAATCGAAGCCGCAGCAACCAC AGCAAAATGCATCAAATTTGTTACAATCTCAAATGCAGCAGTCACAGCCACAGGCTCCACAGCAGCAATTGATGCCACAG ATTCAATCTCAACCTGCGCAATTGCAACAGCAATTGGGTTTACAACAGCAGCCAAATCCATTGCAACGAGATATGCAGCA AAGGCTTCAGGCATCAGGTTCCTTACTTCAACAACAAAGTGTTCTAGATCAACAAAAGCAGTTATATCAGTCACAAAGAC CCCTTCCAGAAACTTCATCAACTTCTATGGATTCTACGGCACAGACTGGACAGCCGAATGGGGGTGATTGGCAAGAAGAA GTGTATCAAAAGATCAAAACCATGAAAGAAAATTACCTGCCTGAGTTGAATGAGATGTACCAGAAAATTGCTACTAAACT TCAGCAGCACGATTCCCTTGCCCAACAATCAAAGTCAGATCAGCTTGAAAAGCTTAAGGTATTTAAAATGATGTTGGAGC GGATTATATCATTCCTCCAGGTGTCCAAGAGCAACATAGCACCTAGTTTCAAGGAAAAACTGGGTTCATACGAGAAGCAG ATTATAAATTTCATAAATACAAATAGACCTAGAAAAGGCATGTCTTCACTGCAGCATCCAGGAAATCTTCCCCCACATCA TATGCATTCCATGTCACAGTCACAACCCCAAGTTACTCAAGTTCAGTCTCTTGAAAATCAAATGAACTCTCAGATGCAAA CAACAAATATGCAAGGTTCTGTAGCAACGATGCAGCAGAATAATATGACAAGCATGCAGCATTCTCTGTCTGGTGTATCT ACATCGCAGCAGAGTATGATGAATTCAATGCAGCCCAGTACCAATTTAGATTCAGGACAAGGAAATGCTATGAACTCCCT GCAACAGGTTCCAGCGAGCTCCCTTCAACAAAACCCTGTTACTGCTCCTCAACAAACTAATGTTAACTCCTTATCTTCAC AAGGTGGGGTTAATTTGATCCAACCAAATCTTAATCCCCTTCAGCCAGGTTCTGGTATGCTTCAACACCAGCAACTAAAA CAACAACAGGAACAACAGATGTTGCAGAGTCAACAATTCAAACAACAATATCAGCGACAATTAATGCAGAGGCAGCAGAT GCTACAGCAACAGCAGCAGCAGCAACAACAGCAGCAGCAGCAGTTACACCAGACAACAAAGCAACAGTTGCCTGCACAAT TGCAGACACATCAAATGCAACAGCTTCACCAAATGAATGATGTAAAGGACATAAATATGAGGCAAGGAATTGGTGTTAAG CCAGGGGTCTTCCAGCAACATCTTGCTTCCAGTCAACGCTCAGCTTATCCCCATCAACAATTGAAACAAGGGAGTCCTTT TCCGGTTTCTTCACCCCAACTCCTCCAGGCAACATCTCCTCAGATTCCACAACATTCGTCGCCCCAGGTTGACCAGCAAA ATCACCACCCATCTCTCACAAAAGTTGCTACTCCTTCTGCTAACTCACCATTTGGACTCCCCACTCCTTCACCTCCCTTG GCTCCATCTCCTATGCCAGGAGATTCTGAAAAGCCTATTTCTGGTGTTTCATCAATGACACATGCTGCAAATATTGGACA TCAACAAACAGGGAGTGCAGCCGCAGCTGCTCAATCCCTTGCCATTGGAACTCCTGGAATATCTGCCTCTCCTCTACTGG CAGAGTTCAGTGGTCCAGATGGTGTTCATGGTAATTCTTTTCCACCAACATCAGGAAAGTCAACTGTTTCTGAGCAGCCT CTTGAGCGCCTAATTAAAGCGGTGAAATCATTGACACCTAACGCATTAAGTGCTGCTGTCAGTGATATTGGTTCAGTTGT CAGCATGAACGATAGGATAGCAGGATCGGCTCCTGGTAATGGATCCAGAGCCGCTGTTGGTGAAGATTTGGTTGCCATGA CCAATTGTCGCCTTCAGGCTAGGAATTTTGTCAACCAAGATGGTGCCAATGGAACCAGGAGGATGAAACGCTGCACCAAT GCTACACCCTTGAATGTTGTATCATCTGCTGGTAGCATGAACGACAGTATCAGGCAGTTAGAAGCTTCTGATTTGGAGTC AACTGCAACATCTAGTATCAAGAAGCCTAGGATTCAGGCTAATCATGCCCTTTTGGAAGAAATTAGGGAGGTTAATCAGC GACTTATCGACACAGTAGTTGACATAAGTGATGAAGAAGTTGATCCAACTGCAGCTGCTGCTGCTGCTGAAGGTGCAGAA GGGACCATTGTCAAATGTTCTTACTGTGCTGTGGCTCTCAGTCCAAGCCTAAAATCCCAATATGCGTCAGCACAGATGTC ACCAATTCAACCCCTGCGCATGCTTGTCCCTACAAATTATCCTACCTGTTCCCCCATATTCCTTGACAAGTTTCCAGTTG AATCCAGTATGGAGAACGAAGATCTTTCGGCGAAAGCAAAGTCCAAGTTCAGCATATCCCTGCGAAGTTTATCACAACCT ATGTCCCTTGGGGCGATAGCAAGGACTTGGGATGTTTGTGCTCGCACTGTTATTTCTGAGTATGCACAGCAGAGCGGCGG AGGGACTTTCAGCTCTAAGTATGGGACTTGGGAGGATTGCTTGGCCATATGA
Protein sequence (LotjaGi3g1v0006200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDNNNNWRPNQGAEPNMDTSDWRGLLQPESRQRIVNKIMDTLKRHLPVSGQEGLQELRKIAQRFEEKIFTAATSQSDYLR KISLKMLTMETKSQGTMANNIQSNQVGPSSKPPDPGLVMQPQGQQHPIPVANQPQSRQQLLSQNIQNNIASQPNLPPVSS LGQTPIQNVGQNSNIQNIAGQNSVGSTIGQNSNMQNIFTGSQRQMQARQQVVSQQQQQPPQNPQQYLYQQQLMRQKLQQQ QQQQQQQQQQQQQQQQQQQQQQQQQNLLQSNQLQSSQQSVMQQPSIIQTSSLSSVQHNQQSNNVQQSTQSMLQQHPQVIR QQQTSMIHQQQTPMNQQSILPPQQQQQQQQLMGPQANATNIQHTQMLGSQNNVGDLQQPQRLLAQQNNLSNLQQQQQQLI NQQNNLSNIHQQLGNNVPGLQPQQVLGSQSGNSGMQTSQHSAHVLQQSKPQQPQQNASNLLQSQMQQSQPQAPQQQLMPQ IQSQPAQLQQQLGLQQQPNPLQRDMQQRLQASGSLLQQQSVLDQQKQLYQSQRPLPETSSTSMDSTAQTGQPNGGDWQEE VYQKIKTMKENYLPELNEMYQKIATKLQQHDSLAQQSKSDQLEKLKVFKMMLERIISFLQVSKSNIAPSFKEKLGSYEKQ IINFINTNRPRKGMSSLQHPGNLPPHHMHSMSQSQPQVTQVQSLENQMNSQMQTTNMQGSVATMQQNNMTSMQHSLSGVS TSQQSMMNSMQPSTNLDSGQGNAMNSLQQVPASSLQQNPVTAPQQTNVNSLSSQGGVNLIQPNLNPLQPGSGMLQHQQLK QQQEQQMLQSQQFKQQYQRQLMQRQQMLQQQQQQQQQQQQQLHQTTKQQLPAQLQTHQMQQLHQMNDVKDINMRQGIGVK PGVFQQHLASSQRSAYPHQQLKQGSPFPVSSPQLLQATSPQIPQHSSPQVDQQNHHPSLTKVATPSANSPFGLPTPSPPL APSPMPGDSEKPISGVSSMTHAANIGHQQTGSAAAAAQSLAIGTPGISASPLLAEFSGPDGVHGNSFPPTSGKSTVSEQP LERLIKAVKSLTPNALSAAVSDIGSVVSMNDRIAGSAPGNGSRAAVGEDLVAMTNCRLQARNFVNQDGANGTRRMKRCTN ATPLNVVSSAGSMNDSIRQLEASDLESTATSSIKKPRIQANHALLEEIREVNQRLIDTVVDISDEEVDPTAAAAAAEGAE GTIVKCSYCAVALSPSLKSQYASAQMSPIQPLRMLVPTNYPTCSPIFLDKFPVESSMENEDLSAKAKSKFSISLRSLSQP MSLGAIARTWDVCARTVISEYAQQSGGGTFSSKYGTWEDCLAI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 22 | 22 | - | – | |
| MobiDBLite | 1 | 17 | 17 | - | – | |
| PANTHER | 6 | 309 | 304 | 4.5E-282 | – | |
| PANTHER | 6 | 309 | 304 | 4.5E-282 | – | |
| Pfam | 20 | 99 | 80 | 1.2E-36 | ||
| Gene3D | 21 | 100 | 80 | 6.4E-22 | ||
| MobiDBLite | 100 | 169 | 70 | - | – | |
| MobiDBLite | 125 | 169 | 45 | - | – | |
| MobiDBLite | 201 | 224 | 24 | - | – | |
| Coils | 229 | 266 | 38 | - | – | |
| MobiDBLite | 275 | 355 | 81 | - | – | |
| PANTHER | 298 | 1321 | 1024 | 4.5E-282 | – | |
| PANTHER | 298 | 1321 | 1024 | 4.5E-282 | – | |
| Coils | 382 | 412 | 31 | - | – | |
| MobiDBLite | 410 | 493 | 84 | - | – | |
| MobiDBLite | 527 | 556 | 30 | - | – | |
| MobiDBLite | 650 | 683 | 34 | - | – | |
| MobiDBLite | 667 | 683 | 17 | - | – | |
| MobiDBLite | 711 | 806 | 96 | - | – | |
| Coils | 796 | 848 | 53 | - | – | |
| MobiDBLite | 888 | 950 | 63 | - | – | |
| MobiDBLite | 888 | 976 | 89 | - | – | |
| MobiDBLite | 951 | 966 | 16 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Transcription coregulator activity | A protein or a member of a complex that interacts specifically and non-covalently with a DNA-bound DNA-binding transcription factor to either activate or repress the transcription of specific genes. Coregulators often act by altering chromatin structure and modifications. For example, one class of transcription coregulators modifies chromatin structure through covalent modification of histones. A second ATP-dependent class modifies the conformation of chromatin. A third class modulates interactions of DNA-binding transcription factor with other transcription coregulators. | ||
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. |
Expression pattern of LotjaGi3g1v0006200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…