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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR036853
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 12 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 7.393s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi1g1v0195400.1
n.a. 50S ribosomal protein L14; TAIR: AT5G46160.2 Ribosomal protein L14p/L23e family protein; Swiss-Prot: sp|Q93Z17|HLP_ARATH 50S ribosomal protein HLP, mitochondrial; TrEMBL-Plants: tr|I3SPI5|I3SPI5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0195400 LjG1.1_chr1 38718491 38724329 -
3 domain predictions
3 GO terms
LotjaGi1g1v0195400.2
n.a. 50S ribosomal protein L14; TAIR: AT5G46160.1 Ribosomal protein L14p/L23e family protein; Swiss-Prot: sp|Q93Z17|HLP_ARATH 50S ribosomal protein HLP, mitochondrial; TrEMBL-Plants: tr|I3SPI5|I3SPI5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0195400 LjG1.1_chr1 38718491 38724329 -
3 domain predictions
3 GO terms
LotjaGi1g1v0195400.3
n.a. 50S ribosomal protein L14; TAIR: AT5G46160.2 Ribosomal protein L14p/L23e family protein; Swiss-Prot: sp|Q93Z17|HLP_ARATH 50S ribosomal protein HLP, mitochondrial; TrEMBL-Plants: tr|I3SPI5|I3SPI5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0195400 LjG1.1_chr1 38718954 38719634 -
3 domain predictions
3 GO terms
LotjaGi1g1v0705000.1
n.a. 50S ribosomal protein L14; TAIR: AT1G04480.1 Ribosomal protein L14p/L23e family protein; Swiss-Prot: sp|P49690|RL23_ARATH 60S ribosomal protein L23; TrEMBL-Plants: tr|A0A0D3CMU0|A0A0D3CMU0_BRAOL Uncharacterized protein; Found in the gene: LotjaGi1g1v0705000 LjG1.1_chr1 127317646 127320681 +
3 domain predictions
3 GO terms
LotjaGi2g1v0164300.1
n.a. 50S ribosomal protein L14; TAIR: AT1G04480.1 Ribosomal protein L14p/L23e family protein; Swiss-Prot: sp|P49690|RL23_ARATH 60S ribosomal protein L23; TrEMBL-Plants: tr|M4FGG9|M4FGG9_BRARP Uncharacterized protein; Found in the gene: LotjaGi2g1v0164300 LjG1.1_chr2 57218020 57229413 -
3 domain predictions
3 GO terms
LotjaGi3g1v0227900.2
n.a. 50S ribosomal protein L16, chloroplastic; TAIR: ATCG00790.1 ribosomal protein L16 (ChrC); Swiss-Prot: sp|Q9BBP9|RK16_LOTJA 50S ribosomal protein L16, chloroplastic; TrEMBL-Plants: tr|A0A067KET2|A0A067KET2_JATCU Uncharacterized protein; Found in the gene: LotjaGi3g1v0227900 LjG1.1_chr3 35474972 35475763 +
3 domain predictions
3 GO terms
LotjaGi3g1v0227900.3
n.a. 50S ribosomal protein L14, chloroplastic; TAIR: ATCG00780.1 ribosomal protein L14 (ChrC); Swiss-Prot: sp|Q9BBQ0|RK14_LOTJA 50S ribosomal protein L14, chloroplastic; TrEMBL-Plants: tr|M7ZR36|M7ZR36_TRIUA 50S ribosomal protein L14, chloroplastic; Found in the gene: LotjaGi3g1v0227900 LjG1.1_chr3 35475020 35475826 +
3 domain predictions
3 GO terms
LotjaGi5g1v0153700.1
n.a. 50S ribosomal protein L14; TAIR: AT1G04480.1 Ribosomal protein L14p/L23e family protein; Swiss-Prot: sp|P49690|RL23_ARATH 60S ribosomal protein L23; TrEMBL-Plants: tr|A0A0D3CMU0|A0A0D3CMU0_BRAOL Uncharacterized protein; Found in the gene: LotjaGi5g1v0153700 LjG1.1_chr5 40029800 40033531 +
3 domain predictions
3 GO terms
LotjaGi6g1v0332700.2
n.a. 50S ribosomal protein L14; TAIR: AT5G46160.1 Ribosomal protein L14p/L23e family protein; Swiss-Prot: sp|Q93Z17|HLP_ARATH 50S ribosomal protein HLP, mitochondrial; TrEMBL-Plants: tr|I3SPI5|I3SPI5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0332700 LjG1.1_chr6 64765370 64766967 +
3 domain predictions
3 GO terms
LotjaGi6g1v0332700.3
n.a. 50S ribosomal protein L14; TAIR: AT5G46160.1 Ribosomal protein L14p/L23e family protein; Swiss-Prot: sp|Q93Z17|HLP_ARATH 50S ribosomal protein HLP, mitochondrial; TrEMBL-Plants: tr|I3SPI5|I3SPI5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0332700 LjG1.1_chr6 64765904 64766584 +
3 domain predictions
3 GO terms
LotjaGi6g1v0332700.4
n.a. 50S ribosomal protein L14; TAIR: AT5G46160.1 Ribosomal protein L14p/L23e family protein; Swiss-Prot: sp|Q93Z17|HLP_ARATH 50S ribosomal protein HLP, mitochondrial; TrEMBL-Plants: tr|I3SPI5|I3SPI5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0332700 LjG1.1_chr6 64765907 64766584 +
3 domain predictions
3 GO terms
LotjaGi6g1v0332700.5
n.a. 50S ribosomal protein L14; TAIR: AT5G46160.1 Ribosomal protein L14p/L23e family protein; Swiss-Prot: sp|Q93Z17|HLP_ARATH 50S ribosomal protein HLP, mitochondrial; TrEMBL-Plants: tr|I3SPI5|I3SPI5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0332700 LjG1.1_chr6 64766177 64766584 +
3 domain predictions
3 GO terms