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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR039131
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 6 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.191s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi3g1v0410600.1
n.a. NADH:ubiquinone oxidoreductase intermediate-associated protein 30; TAIR: AT1G17350.1 NADH:ubiquinone oxidoreductase intermediate-associated protein 30; Swiss-Prot: sp|Q9LQI7|CIA30_ARATH Probable complex I intermediate-associated protein 30; TrEMBL-Plants: tr|I3SKR7|I3SKR7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0410600 LjG1.1_chr3 81436813 81440046 +
2 domain predictions
1 GO term
LotjaGi4g1v0380000.1
n.a. NAD(P)-binding Rossmann-fold superfamily protein; TAIR: AT4G18810.1 NAD(P)-binding Rossmann-fold superfamily protein; Swiss-Prot: sp|O14297|YF1F_SCHPO Uncharacterized protein C9E9.15; TrEMBL-Plants: tr|K7KQJ6|K7KQJ6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0380000 LjG1.1_chr4 75919017 75924768 -
2 domain predictions
1 GO term
LotjaGi4g1v0380000.2
n.a. NAD(P)-binding Rossmann-fold superfamily protein; TAIR: AT4G18810.1 NAD(P)-binding Rossmann-fold superfamily protein; Swiss-Prot: sp|Q94EG6|Y5224_ARATH Uncharacterized protein At5g02240; TrEMBL-Plants: tr|I3S9Y2|I3S9Y2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0380000 LjG1.1_chr4 75919505 75924797 -
2 domain predictions
1 GO term
LotjaGi4g1v0380000.3
n.a. NAD(P)-binding Rossmann-fold superfamily protein; TAIR: AT4G18810.1 NAD(P)-binding Rossmann-fold superfamily protein; Swiss-Prot: sp|Q94EG6|Y5224_ARATH Uncharacterized protein At5g02240; TrEMBL-Plants: tr|I3S9Y2|I3S9Y2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0380000 LjG1.1_chr4 75919889 75921598 -
2 domain predictions
1 GO term
LotjaGi4g1v0380000.4
n.a. NAD(P)-binding Rossmann-fold superfamily protein; TAIR: AT4G18810.1 NAD(P)-binding Rossmann-fold superfamily protein; Swiss-Prot: sp|O14297|YF1F_SCHPO Uncharacterized protein C9E9.15; TrEMBL-Plants: tr|K7KQJ6|K7KQJ6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0380000 LjG1.1_chr4 75919889 75924017 -
2 domain predictions
1 GO term
LotjaGi4g1v0380000.5
n.a. NAD(P)-binding Rossmann-fold superfamily protein; TAIR: AT4G18810.1 NAD(P)-binding Rossmann-fold superfamily protein; Swiss-Prot: sp|O14297|YF1F_SCHPO Uncharacterized protein C9E9.15; TrEMBL-Plants: tr|K7KQJ6|K7KQJ6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0380000 LjG1.1_chr4 75919889 75924515 -
2 domain predictions
1 GO term