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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR039146
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 6 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.595s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi4g1v0349100_LC.2
n.a. Pyruvate dehydrogenase E1 component subunit beta; TAIR: AT3G52350.1 D111/G-patch domain-containing protein; Swiss-Prot: sp|P52904|ODPB_PEA Pyruvate dehydrogenase E1 component subunit beta, mitochondrial; TrEMBL-Plants: tr|A0A0D6DQF0|A0A0D6DQF0_LUPAN Similar to uncharacterized protein; Found in the gene: LotjaGi4g1v0349100_LC LjG1.1_chr4 72793123 72801247 -
2 domain predictions
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LotjaGi5g1v0141800_LC.1
n.a. Pyruvate dehydrogenase E1 component subunit beta; TAIR: AT3G52350.1 D111/G-patch domain-containing protein; Swiss-Prot: sp|P52904|ODPB_PEA Pyruvate dehydrogenase E1 component subunit beta, mitochondrial; TrEMBL-Plants: tr|A0A0D6DQF0|A0A0D6DQF0_LUPAN Similar to uncharacterized protein; Found in the gene: LotjaGi5g1v0141800_LC LjG1.1_chr5 35197711 35206032 +
2 domain predictions
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LotjaGi5g1v0141800_LC.2
n.a. Pyruvate dehydrogenase E1 component subunit beta; TAIR: AT3G52350.1 D111/G-patch domain-containing protein; Swiss-Prot: sp|P52904|ODPB_PEA Pyruvate dehydrogenase E1 component subunit beta, mitochondrial; TrEMBL-Plants: tr|A0A0D6DQF0|A0A0D6DQF0_LUPAN Similar to uncharacterized protein; Found in the gene: LotjaGi5g1v0141800_LC LjG1.1_chr5 35197712 35204836 +
2 domain predictions
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LotjaGi5g1v0141800_LC.3
n.a. Pyruvate dehydrogenase E1 component subunit beta; TAIR: AT3G52350.1 D111/G-patch domain-containing protein; Swiss-Prot: sp|P52904|ODPB_PEA Pyruvate dehydrogenase E1 component subunit beta, mitochondrial; TrEMBL-Plants: tr|A0A0D6DQF0|A0A0D6DQF0_LUPAN Similar to uncharacterized protein; Found in the gene: LotjaGi5g1v0141800_LC LjG1.1_chr5 35197715 35204832 +
2 domain predictions
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LotjaGi5g1v0355300.1
n.a. G-patch domain containing protein, expressed; TAIR: AT5G08535.1 D111/G-patch domain-containing protein; Swiss-Prot: sp|Q6C233|SQS1_YARLI Protein SQS1; TrEMBL-Plants: tr|A0A0D6DQF0|A0A0D6DQF0_LUPAN Similar to uncharacterized protein; Found in the gene: LotjaGi5g1v0355300 LjG1.1_chr5 67061873 67064114 +
2 domain predictions
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LotjaGi5g1v0355300.2
n.a. G-patch domain containing protein, expressed; TAIR: AT5G08535.1 D111/G-patch domain-containing protein; Swiss-Prot: sp|Q6C233|SQS1_YARLI Protein SQS1; TrEMBL-Plants: tr|A0A0D6DQF0|A0A0D6DQF0_LUPAN Similar to uncharacterized protein; Found in the gene: LotjaGi5g1v0355300 LjG1.1_chr5 67061994 67063912 +
2 domain predictions
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