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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR039516
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 6 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.642s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi4g1v0026800.1
n.a. 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside deacetylase; TAIR: AT3G58130.1 N-acetylglucosaminylphosphatidylinositol de-N-acetylase family protein; Swiss-Prot: sp|Q54C64|PIGL_DICDI Probable N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase; TrEMBL-Plants: tr|I3SVY7|I3SVY7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0026800 LjG1.1_chr4 3255635 3261624 +
2 domain predictions
2 GO terms
LotjaGi6g1v0005800.1
n.a. 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside deacetylase; TAIR: AT3G58130.1 N-acetylglucosaminylphosphatidylinositol de-N-acetylase family protein; Swiss-Prot: sp|Q9HDW9|GPI12_SCHPO Probable N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase; TrEMBL-Plants: tr|I3SVY7|I3SVY7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0005800 LjG1.1_chr6 1199074 1212692 -
2 domain predictions
2 GO terms
LotjaGi6g1v0005800.2
n.a. 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside deacetylase; TAIR: AT3G58130.1 N-acetylglucosaminylphosphatidylinositol de-N-acetylase family protein; Swiss-Prot: sp|Q9HDW9|GPI12_SCHPO Probable N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase; TrEMBL-Plants: tr|I3SVY7|I3SVY7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0005800 LjG1.1_chr6 1199508 1212789 -
2 domain predictions
2 GO terms
LotjaGi6g1v0005800.3
n.a. 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside deacetylase; TAIR: AT3G58130.1 N-acetylglucosaminylphosphatidylinositol de-N-acetylase family protein; Swiss-Prot: sp|Q54C64|PIGL_DICDI Probable N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase; TrEMBL-Plants: tr|I3SVY7|I3SVY7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0005800 LjG1.1_chr6 1199508 1212789 -
2 domain predictions
2 GO terms
LotjaGi6g1v0005800.4
n.a. 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside deacetylase; TAIR: AT3G58130.1 N-acetylglucosaminylphosphatidylinositol de-N-acetylase family protein; Swiss-Prot: sp|Q9HDW9|GPI12_SCHPO Probable N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase; TrEMBL-Plants: tr|I3SVY7|I3SVY7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0005800 LjG1.1_chr6 1200151 1212517 -
2 domain predictions
2 GO terms
LotjaGi6g1v0005800.5
n.a. 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside deacetylase; TAIR: AT3G58130.1 N-acetylglucosaminylphosphatidylinositol de-N-acetylase family protein; Swiss-Prot: sp|Q9HDW9|GPI12_SCHPO Probable N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase; TrEMBL-Plants: tr|I3SVY7|I3SVY7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0005800 LjG1.1_chr6 1204037 1212504 -
2 domain predictions
2 GO terms