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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0026800 |
| Transcript ID | LotjaGi4g1v0026800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside deacetylase; TAIR: AT3G58130.1 N-acetylglucosaminylphosphatidylinositol de-N-acetylase family protein; Swiss-Prot: sp|Q54C64|PIGL_DICDI Probable N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase; TrEMBL-Plants: tr|I3SVY7|I3SVY7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0026800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:3255635..3261624) extracted from Lotus japonicus Gifu genome v1.2.
CTATAATGGTAAATAATTCCAAAAGTGCAGGTAAAAAAGTCTCGTTGGTTTTGGTTTGATTTTCCTGAAATTTACCAACC CGGCTCCGAAATAAAATAAAATAAGGGTTTGGTCCTGCTGAAATTGGATTGGATTCAGAGTTTGCTGGGGGATTCGGTCG AATCAAGCTGTAAGAACGTGAAAATCTCTGAACTCTCTTCAATTGCAATTTTCTTTCGTTTTTTTTCTCTTTCTGTTTCT TCCTCTGATTTGTGATTTGTGGTTATGTTAATTGTTTTGATTTTGATATGCTCAGATTTCTTATGGGGCACTGTTACTCA TTTTGTTCATACCCCGGAGTGTGAACTGGTCTGTTATTATTGTTGATATCTTTGTTCCCCTGGAGTGTAAATGTTAGTTG TTAGTACCTCCTCACTCCTCAGGGTTCAAACCCTTCACCCTTCATTTCACCCAACCCTTATGTCTACTAGCTCGTACCAC TTGAGTTAGTCTATTGCATAGTAATGTGGCGAGATTGTTAGAAACTGATTAATGAAGAGTAGGCAAGATAAAGATAATGT AAGAGCACAGACCTGTATACCCAATGTCTCTAGGTTTTCGTAAAGATGTGTCGAGATCTCTTGGTGCTTTGTTGCATGAC CCATTTCGCAAGTCACCCTACTTTCAGGCTCCCCATGTTCGAGTAGGACTGTTAAATTATACTAATGTAGTTCTTTTGTT TGGAATTTTAATTGTGAAATTTAGAGGTTATGATTATATATAGTAATAGTACAACTAATGACTAAACACATCGACTGAGT TGATGACTAATGTGAGTTTCATAACATTGATGCATGCTCCTTTTACTTATATATTCTCATATACCCTTTCACTGTCAGAT TCACACTTGTTCACCACTCTCTTCTTCCTGATTCTTGTGACACATGCAAATTTATCTATTTTGTTGCTAAGAAATCTGGG GAAATTATTATATGTTTTGAACAATCTTTATTGGTTGGTGCATTGTTCAGGTGCAAACTCAATGGCCTTGATTCTGATAA TTACTCCTCTCATTTTTTTGTGGATCATTTCTCTATGCAAAATTCTCCTTCTCTCACGGATCCCTTTCACTAAACATTTT ACACAGAATGGTAGGCTTCTTTCTCCTTCTCTTGTTATCAGGACTTCAATTCTATTTATGTGTCTTATTTTATTTGTCTA AATTTTCATCCTTTTCTCTTTTTTTCTCTATTTTAGTTTCGATCTGTTGTTTTCAGGTAGAGCTCTTCGGAAGAGAAATA TCTTGTTAGTTATTGCTCACCCAGATGATGAATCCATGTAAGTTTGAACCCACTAATTTATTATTTGTGATGTTAATTTG TTGATGACATTAAGAAGTTAATAACTTAATAGCCTTAGATACCTCTCTAATTTTAGATTTTTAATACATTTATGCTACTT TTCTTGTGACAAGGCAATGAAGTAGTGTTTCTCTTTCATGTGGATCTTCTGACATGCCCTATTTAGTTTGGCCAACAGCA TTTAGGGAGAGTGGTGGGTAGGTGAGATGAACATGAAGGAAATTGTAACTATGAACTGAGGGAGTTTCTGAAGAGGAGCT CTGTTCTTGTTTTCTTGAATGCAATTACATTTTCTGCATAACTACACTGACCTATCATAGACTAAGAGTGTGTTTGAAAG ACCCCTAGATTTCAAAGAAAAATCAACTGAATATCATAAATTTCAATAAAAAATATTCAAAGGAAGGAATGCATATATTT CTTCAAAGGAAAATACCATACACTTCAAAGGCCTCTCTTATCTATATTCCTTTCTCTTCTTTTTCTGTTGCGTTATAAAT CATAATCTAACTCACATAAACCACGATTTCTTTGTAAATGAATCTAACATTGTACCAATATAACTTTGTTAACTTCAGCG AATTGCATATTTTATGGGGTGTTTGAGTTGTAGTGCAGTGAAGGCCTTTGAAGTTTGACTATTTTTTTCAAATTTCTGCA TTATGATTTCACACTGTCGTCTTTTTCCATTTCTGCAGGTTCTTTACCCCAACTATAAATTTTCTGACTTCAAGAGGGCA TAATGTTCAAATACTTTGCTTATCAATTGGTGATTAGCTTTGGACGATCTGTTTGTCTTGTAATTTATAGCACTTATGGA TATGTTTGTCTTTATGTTGATTCTTTTGTGCTTTGTTTGTCACTTTATACTCATTTTTAATGAACTTTAAAATAACTGTA ATTTTTATTTCTCCCTATTCAGTGGTTGAGTTTTCTTCAAGTTTCATCTTTCTAATTAAGCCAGTTTAGTTTTTGAAAAA GAAGATAATTTCGAGCCATTTCTAGCATGTAGAGTTTTATACTATTAATGAAACATTTTTTTGGACTTCAACATTCACAC TTTGGCATTGATATTTATTTAAAATATCATATGCAAAAAGAAGTCCAATATTATTGGTTAGATGATAATAGACATATATG GAATAATCAAACTAATAAAGTATTCCAGCATTAAGAATCTGATTTTATCCTGAGCTACACAGCTCAGATTAATTGTATAT TTTCACTTTTTGCATGCAATGAGAATTTCATTTTTCCTTTTATTCCTTTTCTATAATAATTCTATTCAATAGTTTTTAAT TAATGAAAGATATAATTTTGGATATGAAAGGTTTATGGCTGTAAATCTATCTTACAATGTTAGATTTGGGATTTCTGGAT GTCACAAAATCAAAGCTTCTCAGCTTAGGCTCTGAAAAGACTAGAAGTTTATGTTTCAATCTGTTAGATATTTTTGAATT GTTATTATTTTTCTGTAGGTGATGCAGATGGCAAAGGAAACATTAGAAAACAAGAGCTTTTTCAAGCTTGTGTAGCCCTC AAGGTGATTTACAAAATGGCTTAATTGATTGTTTACAGACATAATGTAGAGCTTCTCTTCTCATTAAACATGACCCCAGT ATTAAAACAATTTTATTTTTTCCTTACATCATTTAGCTATGGTTTCTTGTCACAAATTTCTTGGGAAACATAGGGAGCCT GTCCTTGATAATGTTCTTTACATAGGTTAAAGATGACAGTCTAAGTTTAGCAATATCATAACGGTATTGTTTATATAACA TGGGTAATTTTGTACTTAGATTCCGATGCAACAAGTGAAGATGGTCAATCATCCAGATCTGCAGGTTTTGATCCAATAGG TCTCTGAAGTTATAAAAATCAGTATCATTTCAAATCTTATTGTTAGTGTCTTATATTGCCATTGTTTAATCTGTTGCCGT TCTTAGGATGGCTTTGGCAAAGTTTGGAATCATATCTTATTGGCAAAGATCATTGAGGAGGAAATAACTAGTCACTGCAT TGATATGGTAAGACCGTGTCTCTGTACCACTATTGTCATTTTTGGGGTTGTAAACGTGGTTTGAGTCATGAAGCTTCCAT TTGTGCTGCCATAAGGATCTTTTGGATGACTAGTACTTTGTTCAATACTTAAGACCTACTTCTCACTTACCCTCTTTTCC CCAGATTATTACTTTTGACAACTACGGCGTCTCAGGTCATTGTAATCATCGTGATGTGCATTATGGAGTATGGTAAGTTT AACTATTTTTATACACTACTACTGATCAGTATTGAAGAACTTTAACTGGAATATTATGGAGATAGAACTTTAACTGGAAT ATTGTGGAGATTAATACTAGTACTGTTTCAGATTTCTTTTACACTGCCAACCCCATTGCTCCCACCCTTTTGTACAGGCC AGCTGTGTGGTGTTATTTTATGCTTGTTAGGAGTTGATGGTTAGGTTACTTACAGTACTGAACTAACCTTGAACAGCTTT TCTAATTCCTATTGATTTGTTTTTTAAACATAGTGAAGTTTTGCTAAAAAACTCCGGTCCAGTGTTTCTGATCAGAGAAA CAGTAGTTGTTATGAAATGAAGTGAGAAGAGTGATGTGTCAATTGACTTCCAAATAATGCAGCAACTGATTTTGATTACT TGTGCAATTGTGCAACTGCTCAACTCCATGAATCTTAGTGTTTTTTATATGCTCTGTGTTCCTTGCCTTCTTTAGTCATA CCACATAGAACAACTCTTCTGATTATACCCGTCTTGGTAAAAAAAAAATGATATTGATATTTGACTACGCACGGTTCTGA TGGCAATTGGTTAATTGTCTGAGCAATCTTGCTGTTCATTGTGTTGTTTTTTTGTCATAACGTGAAGAGGAAAATATCAT AAGAGTACAAGATGAGAGAAAATAAACGATAATTGCTGCAAAAGATAGTTTTTTCATTGGTACTACTACTTGAATTTGAA TACACTTGAACTCCATAATTTTAGAAACGGACTCAAACCTAATTAAAATAAACAGAGAATATCTTTTCAACTATCAAATC AAAATCTAACTTATTCAAATTCAGATAAATTTGGAAGTATCCAAAGGCACACTTTCAACACATTGTGCCTTGCTGATCGT TAGAATTAGCCTTGCGGATTCTTTCACGGTTCTTTCAGTCCTCATGTCTTGTGTGGTCTCTATCATAGTATCCTAACGAG TGAAAGGTTATGGGAGTTAAGTTCAAGTGGAATGATGATTTACATATTTAAATTTTACTCAATAGGCAGGCTAATCACAT ATCACTCTTCCATTCCTGTATTGCAATGACACTAAATTTTTTCCCTATTGTAAGCAGCAAGCTACTGCATGATACTTTAC GAAAAGATGTTGAAGTTTGGGAGCTTGTATGTTTTTGCTTTCCTAATTTTATTTTTTTTATCTTATTAGGCCAATTACTT TATTAAAAACTGTTTAATTGACTTATTCGCTTGTGTTTTCTTCCTTATTCTTAGATTAGCACCAACATATTACGCAAATA TAGCGGTCCTGTTGATATCTGGCTGTCCATGTTTTGGGCCATGCTGCACTCAAATGGAACAATGCAATGCTTGGTAAATG AACATTATTGTAGGAGCCTTAAAGCTATGGCCCAGCACTCAAGCCAGTGGGTGTGGTATGCTTGCTTTATCTTACTTTTA TTGTAAAGCTGTGGACTTAATATTATTATTTATATACTTCAATTGAAGGTATCCCAAGAGACCTTGCACAACAGAATAAC TTTTTCTCCATCTAAAAATTAATTTCACTTCTGCAGGTTTCGCAAGCTTTTTGTTGCGTTGTCGAGTTATACCTATATGA ACACTCTTAGAAAGATCAAGTGAAGTTACAGTGCTGAAAAGTTGTGGCGAGTATGAGATCAGCTTTCATTTGCTGCTATC CTGTTTGGCATTTACATAACCCTGTAAATCGAACTTTTCTCAAGCTATTCATTAAGTGGAACTGTAGGTCAAGCAGCCTT TCACTTTCTTTTGACATGATTGAATGGAATCATTACTCACCACTGATTATCTTCAAATTATCCTAAAGGCCTATGTTCAT TAACAGTGATCTAAGTTCGTTGGTTTTGGCTTAGTTTTCAATTGTTTGTACTGGTAAAGTAGCACAGTAACTTTTTGCTT TTGATTCAATTTGGATAATATTGTGGTTGATTGTTTGTCATTTGCATTATCGTGGTGAAAAGTTTTTTTTAATATTGAAA TTTTAGGATTCTAGATATTAGGGGTTTAGATTTTGATTTAGTTTCTTTCTTTCTTTTCTATTAGGGTTTATTTTTTATTT GGGTTGTTTATCTTTTAGATCAAGTGTATCTTTTGTAACCAAAATAAAAGATCAAGAGTATTTCTATTTTAGAAGTTGAT ATTTTACTTTAGTTGTCTATTTTTATTTTAGGAATCTATCTTTATAGAGTTAGATTAATATAAGTAGGAGGAGTCAGTTT TGGAATTGAGTAGTAAGGGAATTTCCCTTGTAAAAGAAGGATTTTCCTTCTTGGGTTACCTTTTATTTTAATAAATTCAG TTTTTAATTCAGAAAATTACAGTTCTGCCCCTTTTCACTTTGCTGTTTCACTGTTTGGGTAATCAAACTC
CDS sequence (LotjaGi4g1v0026800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCCTTGATTCTGATAATTACTCCTCTCATTTTTTTGTGGATCATTTCTCTATGCAAAATTCTCCTTCTCTCACGGAT CCCTTTCACTAAACATTTTACACAGAATGGTAGAGCTCTTCGGAAGAGAAATATCTTGTTAGTTATTGCTCACCCAGATG ATGAATCCATGTTCTTTACCCCAACTATAAATTTTCTGACTTCAAGAGGGCATAATGTTCAAATACTTTGCTTATCAATT GGTGATGCAGATGGCAAAGGAAACATTAGAAAACAAGAGCTTTTTCAAGCTTGTGTAGCCCTCAAGATTCCGATGCAACA AGTGAAGATGGTCAATCATCCAGATCTGCAGGATGGCTTTGGCAAAGTTTGGAATCATATCTTATTGGCAAAGATCATTG AGGAGGAAATAACTAGTCACTGCATTGATATGATTATTACTTTTGACAACTACGGCGTCTCAGGTCATTGTAATCATCGT GATGTGCATTATGGAGTATGCAAGCTACTGCATGATACTTTACGAAAAGATGTTGAAGTTTGGGAGCTTATTAGCACCAA CATATTACGCAAATATAGCGGTCCTGTTGATATCTGGCTGTCCATGTTTTGGGCCATGCTGCACTCAAATGGAACAATGC AATGCTTGGTAAATGAACATTATTGTAGGAGCCTTAAAGCTATGGCCCAGCACTCAAGCCAGTGGGTGTGGTTTCGCAAG CTTTTTGTTGCGTTGTCGAGTTATACCTATATGAACACTCTTAGAAAGATCAAGTGA
Protein sequence (LotjaGi4g1v0026800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MALILIITPLIFLWIISLCKILLLSRIPFTKHFTQNGRALRKRNILLVIAHPDDESMFFTPTINFLTSRGHNVQILCLSI GDADGKGNIRKQELFQACVALKIPMQQVKMVNHPDLQDGFGKVWNHILLAKIIEEEITSHCIDMIITFDNYGVSGHCNHR DVHYGVCKLLHDTLRKDVEVWELISTNILRKYSGPVDIWLSMFWAMLHSNGTMQCLVNEHYCRSLKAMAQHSSQWVWFRK LFVALSSYTYMNTLRKIK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 19 | 19 | - | – | |
| Phobius | 1 | 2 | 2 | - | – | |
| TMHMM | 2 | 24 | 23 | - | – | |
| Phobius | 3 | 15 | 13 | - | – | |
| PANTHER | 5 | 257 | 253 | 1.3E-108 | ||
| PANTHER | 5 | 257 | 253 | 1.3E-108 | ||
| Phobius | 16 | 19 | 4 | - | – | |
| Phobius | 20 | 258 | 239 | - | – | |
| Gene3D | 23 | 256 | 234 | 4.8E-20 | ||
| SUPERFAMILY | 42 | 255 | 214 | 8.5E-48 | ||
| Pfam | 46 | 166 | 121 | 3.6E-22 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | N-acetylglucosaminylphosphatidylinositol deacetylase activity | Catalysis of the reaction: N-acetyl-D-glucosaminylphosphatidylinositol + H2O = D-glucosaminylphosphatidylinositol + acetate. This reaction is the second step of the biosynthesis of glycosylphosphatidylinositol (GPI), used to anchor various eukaryotic proteins to the cell-surface membrane. | ||
| Biological process | GPI anchor biosynthetic process | The chemical reactions and pathways resulting in the formation of a glycosylphosphatidylinositol (GPI) anchor that attaches some membrane proteins to the lipid bilayer of the cell membrane. The phosphatidylinositol group is linked via the C-6 hydroxyl residue of inositol to a carbohydrate chain which is itself linked to the protein via an ethanolamine phosphate group, its amino group forming an amide linkage with the C-terminal carboxyl of the protein. Some GPI anchors have variants on this canonical linkage. |
Expression pattern of LotjaGi4g1v0026800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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