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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR039717
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

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Download the entire search result as a CSV file.

We have found 6 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 7.865s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi4g1v0179900_LC.1
n.a. Armadillo/beta-catenin-like repeat protein; TAIR: AT1G14300.1 ARM repeat superfamily protein; Swiss-Prot: sp|Q8C3I8|HGH1_MOUSE Protein HGH1 homolog; TrEMBL-Plants: tr|I3STU3|I3STU3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0179900_LC LjG1.1_chr4 36970728 36983394 +
2 domain predictions
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LotjaGi4g1v0179900_LC.2
n.a. Armadillo/beta-catenin-like repeat protein; TAIR: AT1G14300.1 ARM repeat superfamily protein; Swiss-Prot: sp|Q8C3I8|HGH1_MOUSE Protein HGH1 homolog; TrEMBL-Plants: tr|I3STU3|I3STU3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0179900_LC LjG1.1_chr4 36970822 36976498 +
2 domain predictions
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LotjaGi4g1v0179900_LC.3
n.a. Armadillo/beta-catenin-like repeat protein; TAIR: AT1G14300.1 ARM repeat superfamily protein; Swiss-Prot: sp|Q76NW7|HGH1_DICDI Protein HGH1 homolog; TrEMBL-Plants: tr|I3STU3|I3STU3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0179900_LC LjG1.1_chr4 36970822 36983040 +
2 domain predictions
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LotjaGi4g1v0179900_LC.4
n.a. Armadillo/beta-catenin-like repeat protein; TAIR: AT1G14300.1 ARM repeat superfamily protein; Swiss-Prot: sp|Q8C3I8|HGH1_MOUSE Protein HGH1 homolog; TrEMBL-Plants: tr|I3STU3|I3STU3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0179900_LC LjG1.1_chr4 36970822 36983040 +
2 domain predictions
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LotjaGi4g1v0182200.1
n.a. Armadillo/beta-catenin-like repeat protein; TAIR: AT1G14300.1 ARM repeat superfamily protein; Swiss-Prot: sp|Q8C3I8|HGH1_MOUSE Protein HGH1 homolog; TrEMBL-Plants: tr|I3STU3|I3STU3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0182200 LjG1.1_chr4 38541973 38555774 +
2 domain predictions
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LotjaGi4g1v0182200.2
n.a. Armadillo/beta-catenin-like repeat protein; TAIR: AT1G14300.1 ARM repeat superfamily protein; Swiss-Prot: sp|Q76NW7|HGH1_DICDI Protein HGH1 homolog; TrEMBL-Plants: tr|I3STU3|I3STU3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0182200 LjG1.1_chr4 38542120 38554339 +
2 domain predictions
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