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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR040376
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

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Download the entire search result as a CSV file.

We have found 4 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 7.686s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi2g1v0199300.1
n.a. 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; TAIR: AT3G18050.1 GPI-anchored protein; Swiss-Prot: sp|Q9SUC9|UGPI7_ARATH Uncharacterized GPI-anchored protein At4g28100; TrEMBL-Plants: tr|I1KJ34|I1KJ34_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0199300 LjG1.1_chr2 63540499 63544926 +
2 domain predictions
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LotjaGi2g1v0199300.2
n.a. 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; TAIR: AT3G18050.1 GPI-anchored protein; Swiss-Prot: sp|Q9SUC9|UGPI7_ARATH Uncharacterized GPI-anchored protein At4g28100; TrEMBL-Plants: tr|I1KJ34|I1KJ34_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0199300 LjG1.1_chr2 63540499 63544971 +
2 domain predictions
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LotjaGi3g1v0459800.1
n.a. Transmembrane protein, putative; TAIR: AT4G28100.1 transmembrane protein; Swiss-Prot: sp|Q9SUC9|UGPI7_ARATH Uncharacterized GPI-anchored protein At4g28100; TrEMBL-Plants: tr|A0A0L9V618|A0A0L9V618_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0459800 LjG1.1_chr3 87449219 87451541 +
2 domain predictions
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LotjaGi4g1v0462600.1
n.a. Transmembrane protein, putative; TAIR: AT3G18050.1 GPI-anchored protein; Swiss-Prot: sp|Q9SUC9|UGPI7_ARATH Uncharacterized GPI-anchored protein At4g28100; TrEMBL-Plants: tr|I3SI65|I3SI65_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0462600 LjG1.1_chr4 83299772 83302902 -
2 domain predictions
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