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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR042180
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 4 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.698s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi1g1v0218100.1
n.a. RP/EB family microtubule-associated protein; TAIR: AT5G62500.1 end binding protein 1B; Swiss-Prot: sp|Q9FJJ5|EB1B_ARATH Microtubule-associated protein RP/EB family member 1B; TrEMBL-Plants: tr|A0A072TJV8|A0A072TJV8_MEDTR RP/EB family microtubule-associated protein; Found in the gene: LotjaGi1g1v0218100 LjG1.1_chr1 48289214 48294288 +
2 domain predictions
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LotjaGi2g1v0405000.4
n.a. RP/EB family microtubule-associated protein; TAIR: AT5G67270.1 end binding protein 1C; Swiss-Prot: sp|Q9FGQ6|EB1C_ARATH Microtubule-associated protein RP/EB family member 1C; TrEMBL-Plants: tr|I3S6W4|I3S6W4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0405000 LjG1.1_chr2 90189722 90191625 -
2 domain predictions
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LotjaGi4g1v0249000.1
n.a. RP/EB family microtubule-associated protein; TAIR: AT3G47690.1 microtubule end binding protein EB1A; Swiss-Prot: sp|Q7XJ60|EB1A_ARATH Microtubule-associated protein RP/EB family member 1A; TrEMBL-Plants: tr|I1MTS4|I1MTS4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0249000 LjG1.1_chr4 60192454 60196470 -
2 domain predictions
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LotjaGi4g1v0249000.2
n.a. RP/EB family microtubule-associated protein; TAIR: AT5G62500.1 end binding protein 1B; Swiss-Prot: sp|Q9FJJ5|EB1B_ARATH Microtubule-associated protein RP/EB family member 1B; TrEMBL-Plants: tr|K7MKV8|K7MKV8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0249000 LjG1.1_chr4 60192730 60196203 -
2 domain predictions
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