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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR043502
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We have found 736 results. Now displaying 1 of 15 with 50 rows per page. This search has taken 0.290s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi0g1v0001300_LC.1
n.a. Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A151R7Z9|A0A151R7Z9_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi0g1v0001300_LC LjG1.1_chr0 1744651 1746795 +
2 domain predictions
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LotjaGi0g1v0002500_LC.1
n.a. Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A151R7Z9|A0A151R7Z9_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi0g1v0002500_LC LjG1.1_chr0 2864012 2866166 -
2 domain predictions
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LotjaGi0g1v0002600_LC.1
n.a. Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A178U8C0|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi0g1v0002600_LC LjG1.1_chr0 2947128 2949281 -
2 domain predictions
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LotjaGi0g1v0002700_LC.1
n.a. Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A178U8C0|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi0g1v0002700_LC LjG1.1_chr0 3023284 3025437 -
2 domain predictions
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LotjaGi0g1v0002800_LC.1
n.a. Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A178U8C0|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi0g1v0002800_LC LjG1.1_chr0 3098237 3100390 -
2 domain predictions
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LotjaGi1g1v0003200_LC.1
n.a. Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q9UR07|TF211_SCHPO Transposon Tf2-11 polyprotein; TrEMBL-Plants: tr|A0A151T1H3|A0A151T1H3_CAJCA Transposon Ty3-G Gag-Pol polyprotein; Found in the gene: LotjaGi1g1v0003200_LC LjG1.1_chr1 712323 712689 +
2 domain predictions
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LotjaGi1g1v0009100_LC.1
n.a. Transposon TX1 uncharacterized; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp|P14381|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein; TrEMBL-Plants: tr|A0A151SF42|A0A151SF42_CAJCA Transposon TX1 uncharacterized; Found in the gene: LotjaGi1g1v0009100_LC LjG1.1_chr1 1181503 1185305 -
2 domain predictions
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LotjaGi1g1v0012000_LC.1
n.a. LINE-1 reverse transcriptase like; TAIR: AT3G24255.4 RNA-directed DNA polymerase (reverse transcriptase)-related family protein; Swiss-Prot: sp|P14381|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein; TrEMBL-Plants: tr|A0A151RYW3|A0A151RYW3_CAJCA Transposon TX1 uncharacterized; Found in the gene: LotjaGi1g1v0012000_LC LjG1.1_chr1 1492990 1497101 -
2 domain predictions
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LotjaGi1g1v0012600_LC.1
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151SS25|A0A151SS25_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0012600_LC LjG1.1_chr1 1589327 1590781 +
2 domain predictions
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LotjaGi1g1v0015200_LC.1
n.a. LINE-1 reverse transcriptase like; TAIR: AT3G24255.4 RNA-directed DNA polymerase (reverse transcriptase)-related family protein; Swiss-Prot: sp|P14381|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein; TrEMBL-Plants: tr|A0A151RYW3|A0A151RYW3_CAJCA Transposon TX1 uncharacterized; Found in the gene: LotjaGi1g1v0015200_LC LjG1.1_chr1 1960853 1983039 +
2 domain predictions
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LotjaGi1g1v0016200_LC.2
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P04146|COPIA_DROME Copia protein; TrEMBL-Plants: tr|A0A1J6KQ13|A0A1J6KQ13_NICAT Putative mitochondrial protein; Found in the gene: LotjaGi1g1v0016200_LC LjG1.1_chr1 2064621 2065217 +
2 domain predictions
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LotjaGi1g1v0018100_LC.2
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: ATMG00810.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P92519|M810_ARATH Uncharacterized mitochondrial protein AtMg00810; TrEMBL-Plants: tr|A0A151SI33|A0A151SI33_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0018100_LC LjG1.1_chr1 2247148 2248279 +
2 domain predictions
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LotjaGi1g1v0018100_LC.3
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P04146|COPIA_DROME Copia protein; TrEMBL-Plants: tr|A0A0V0HRA1|A0A0V0HRA1_SOLCH Putative ovule protein; Found in the gene: LotjaGi1g1v0018100_LC LjG1.1_chr1 2247148 2248279 +
2 domain predictions
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LotjaGi1g1v0018100_LC.4
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P04146|COPIA_DROME Copia protein; TrEMBL-Plants: tr|A0A0V0HRA1|A0A0V0HRA1_SOLCH Putative ovule protein; Found in the gene: LotjaGi1g1v0018100_LC LjG1.1_chr1 2247535 2248130 +
2 domain predictions
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LotjaGi1g1v0018200_LC.1
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P04146|COPIA_DROME Copia protein; TrEMBL-Plants: tr|A0A1J6KQ13|A0A1J6KQ13_NICAT Putative mitochondrial protein; Found in the gene: LotjaGi1g1v0018200_LC LjG1.1_chr1 2240345 2240941 -
2 domain predictions
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LotjaGi1g1v0020800_LC.1
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P04146|COPIA_DROME Copia protein; TrEMBL-Plants: tr|A0A0V0HRA1|A0A0V0HRA1_SOLCH Putative ovule protein; Found in the gene: LotjaGi1g1v0020800_LC LjG1.1_chr1 2558546 2559142 +
2 domain predictions
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LotjaGi1g1v0030600_LC.1
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P92519|M810_ARATH Uncharacterized mitochondrial protein AtMg00810; TrEMBL-Plants: tr|A0A0V0HRA1|A0A0V0HRA1_SOLCH Putative ovule protein; Found in the gene: LotjaGi1g1v0030600_LC LjG1.1_chr1 3913235 3917905 -
2 domain predictions
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LotjaGi1g1v0033500_LC.2
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: ATMG00810.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P92519|M810_ARATH Uncharacterized mitochondrial protein AtMg00810; TrEMBL-Plants: tr|A0A1J6KQ13|A0A1J6KQ13_NICAT Putative mitochondrial protein; Found in the gene: LotjaGi1g1v0033500_LC LjG1.1_chr1 4365661 4366352 -
2 domain predictions
 –
LotjaGi1g1v0034600_LC.1
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P04146|COPIA_DROME Copia protein; TrEMBL-Plants: tr|A0A1J6KQ13|A0A1J6KQ13_NICAT Putative mitochondrial protein; Found in the gene: LotjaGi1g1v0034600_LC LjG1.1_chr1 4593171 4593767 -
2 domain predictions
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LotjaGi1g1v0035300_LC.1
n.a. DNA polymerase I; TAIR: AT1G50840.1 polymerase gamma 2; Swiss-Prot: sp|F4I6M1|POLIA_ARATH DNA polymerase I A, chloroplastic/mitochondrial; TrEMBL-Plants: tr|G7K3G7|G7K3G7_MEDTR PolI-like B DNA polymerase; Found in the gene: LotjaGi1g1v0035300_LC LjG1.1_chr1 4741494 4748257 -
2 domain predictions
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LotjaGi1g1v0037500_LC.1
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151U3B8|A0A151U3B8_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0037500_LC LjG1.1_chr1 5247271 5259850 -
2 domain predictions
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LotjaGi1g1v0041900_LC.1
n.a. Retrovirus-related Pol polyprotein from transposon 297 family; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A151R7X5|A0A151R7X5_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi1g1v0041900_LC LjG1.1_chr1 5722398 5724289 -
2 domain predictions
 –
LotjaGi1g1v0048500_LC.1
n.a. Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|B5U9W0|B5U9W0_LOTJA Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0048500_LC LjG1.1_chr1 6637079 6696859 +
2 domain predictions
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LotjaGi1g1v0048500_LC.2
n.a. Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|B5U9W0|B5U9W0_LOTJA Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0048500_LC LjG1.1_chr1 6642053 6674912 +
2 domain predictions
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LotjaGi1g1v0065000_LC.1
n.a. Retrovirus-related Pol polyprotein from transposon 297 family; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q8I7P9|POL5_DROME Retrovirus-related Pol polyprotein from transposon opus; TrEMBL-Plants: tr|A0A151T8F3|A0A151T8F3_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi1g1v0065000_LC LjG1.1_chr1 9000350 9000816 +
2 domain predictions
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LotjaGi1g1v0069200.1
n.a. Pol polyprotein; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|B8YLY7|B8YLY7_LOTJA Gag-Pol polyprotein; Found in the gene: LotjaGi1g1v0069200 LjG1.1_chr1 9560405 9566650 +
2 domain predictions
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LotjaGi1g1v0071400_LC.1
n.a. Transposon TX1 uncharacterized; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp|P14381|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein; TrEMBL-Plants: tr|A0A151SF42|A0A151SF42_CAJCA Transposon TX1 uncharacterized; Found in the gene: LotjaGi1g1v0071400_LC LjG1.1_chr1 10098219 10101909 -
2 domain predictions
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LotjaGi1g1v0073100_LC.1
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P04146|COPIA_DROME Copia protein; TrEMBL-Plants: tr|A0A1J6KQ13|A0A1J6KQ13_NICAT Putative mitochondrial protein; Found in the gene: LotjaGi1g1v0073100_LC LjG1.1_chr1 10226161 10226757 +
2 domain predictions
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LotjaGi1g1v0076500_LC.1
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P92519|M810_ARATH Uncharacterized mitochondrial protein AtMg00810; TrEMBL-Plants: tr|A0A151SFY7|A0A151SFY7_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0076500_LC LjG1.1_chr1 11014668 11015264 +
2 domain predictions
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LotjaGi1g1v0089900_LC.1
n.a. Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00850.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A061F1K1|A0A061F1K1_THECC Retrotransposon-like protein; Found in the gene: LotjaGi1g1v0089900_LC LjG1.1_chr1 13118923 13123405 -
2 domain predictions
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LotjaGi1g1v0090200_LC.1
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P04146|COPIA_DROME Copia protein; TrEMBL-Plants: tr|A0A1J6KQ13|A0A1J6KQ13_NICAT Putative mitochondrial protein; Found in the gene: LotjaGi1g1v0090200_LC LjG1.1_chr1 13160069 13160727 -
2 domain predictions
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LotjaGi1g1v0100200_LC.1
n.a. Gypsy/Ty3 element polyprotein, putative; TAIR: AT1G42190.1 GAG/POL/ENV polyprotein; Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|B5U9W1|B5U9W1_LOTJA Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0100200_LC LjG1.1_chr1 15249593 15251453 +
2 domain predictions
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LotjaGi1g1v0100400_LC.1
n.a. LINE-1 reverse transcriptase; TAIR: ATMG01250.1 RNA-directed DNA polymerase (reverse transcriptase) (ChrM); Swiss-Prot: sp|P08548|LIN1_NYCCO LINE-1 reverse transcriptase homolog; TrEMBL-Plants: tr|A0A151R3M6|A0A151R3M6_CAJCA Putative ribonuclease H protein family; Found in the gene: LotjaGi1g1v0100400_LC LjG1.1_chr1 15260713 15266821 -
2 domain predictions
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LotjaGi1g1v0106200_LC.1
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P04146|COPIA_DROME Copia protein; TrEMBL-Plants: tr|A0A1J6KQ13|A0A1J6KQ13_NICAT Putative mitochondrial protein; Found in the gene: LotjaGi1g1v0106200_LC LjG1.1_chr1 16525370 16525966 -
2 domain predictions
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LotjaGi1g1v0107300_LC.1
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: ATMG00810.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151TNK0|A0A151TNK0_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0107300_LC LjG1.1_chr1 16684428 16684935 -
2 domain predictions
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LotjaGi1g1v0113700_LC.1
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|B8YLY7|B8YLY7_LOTJA Gag-Pol polyprotein; Found in the gene: LotjaGi1g1v0113700_LC LjG1.1_chr1 17812207 17817770 -
2 domain predictions
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LotjaGi1g1v0114000_LC.1
n.a. Pol-polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A151U9S6|A0A151U9S6_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi1g1v0114000_LC LjG1.1_chr1 17920572 17921795 +
2 domain predictions
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LotjaGi1g1v0123900_LC.1
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P04146|COPIA_DROME Copia protein; TrEMBL-Plants: tr|A0A1J6KQ13|A0A1J6KQ13_NICAT Putative mitochondrial protein; Found in the gene: LotjaGi1g1v0123900_LC LjG1.1_chr1 19654875 19655471 +
2 domain predictions
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LotjaGi1g1v0129300_LC.1
n.a. Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P09523|POL_FMVD Enzymatic polyprotein; TrEMBL-Plants: tr|A0A151R3E4|A0A151R3E4_CAJCA Polyprotein; Found in the gene: LotjaGi1g1v0129300_LC LjG1.1_chr1 20616488 20617421 -
2 domain predictions
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LotjaGi1g1v0130800_LC.2
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151TIH6|A0A151TIH6_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0130800_LC LjG1.1_chr1 21001581 21020390 +
2 domain predictions
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LotjaGi1g1v0130800_LC.4
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151TIH6|A0A151TIH6_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0130800_LC LjG1.1_chr1 21001615 21019939 +
2 domain predictions
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LotjaGi1g1v0130800_LC.6
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151TIH6|A0A151TIH6_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0130800_LC LjG1.1_chr1 21010760 21019930 +
2 domain predictions
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LotjaGi1g1v0130800_LC.8
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151TIH6|A0A151TIH6_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0130800_LC LjG1.1_chr1 21013007 21019939 +
2 domain predictions
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LotjaGi1g1v0134700_LC.1
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151RF77|A0A151RF77_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0134700_LC LjG1.1_chr1 21727012 21737502 -
2 domain predictions
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LotjaGi1g1v0135000_LC.1
n.a. LINE-1 reverse transcriptase-like protein; TAIR: AT4G20520.1 RNA binding / RNA-directed DNA polymerase; Swiss-Prot: sp|P11369|LORF2_MOUSE LINE-1 retrotransposable element ORF2 protein; TrEMBL-Plants: tr|A0A1D5U5S1|A0A1D5U5S1_WHEAT Uncharacterized protein; Found in the gene: LotjaGi1g1v0135000_LC LjG1.1_chr1 21756355 21759438 -
2 domain predictions
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LotjaGi1g1v0135800_LC.1
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151THK7|A0A151THK7_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0135800_LC LjG1.1_chr1 22070933 22071528 -
2 domain predictions
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LotjaGi1g1v0136100_LC.1
n.a. Gag-pol polyprotein; TAIR: AT3G29750.1 Eukaryotic aspartyl protease family protein; Swiss-Prot: sp|P20825|POL2_DROME Retrovirus-related Pol polyprotein from transposon 297; TrEMBL-Plants: tr|A0A151RBM5|A0A151RBM5_CAJCA Retrovirus-related Pol polyprotein from transposon 297 family; Found in the gene: LotjaGi1g1v0136100_LC LjG1.1_chr1 22106806 22107769 -
2 domain predictions
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LotjaGi1g1v0143500_LC.1
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P92519|M810_ARATH Uncharacterized mitochondrial protein AtMg00810; TrEMBL-Plants: tr|A0A151UBF2|A0A151UBF2_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0143500_LC LjG1.1_chr1 23844873 23845250 +
2 domain predictions
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LotjaGi1g1v0153100_LC.1
n.a. LINE-1 reverse transcriptase isogeny; TAIR: AT3G24255.7 RNA-directed DNA polymerase (reverse transcriptase)-related family protein; Swiss-Prot: sp|P0C2F6|RNHX1_ARATH Putative ribonuclease H protein At1g65750; TrEMBL-Plants: tr|A0A151QR03|A0A151QR03_CAJCA Transposon TX1 uncharacterized; Found in the gene: LotjaGi1g1v0153100_LC LjG1.1_chr1 26643165 26644514 +
2 domain predictions
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LotjaGi1g1v0153800_LC.1
n.a. Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q7LHG5|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A151QNT0|A0A151QNT0_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi1g1v0153800_LC LjG1.1_chr1 26845339 26848257 +
2 domain predictions
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