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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • PTHR11206:SF323
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

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Download the entire search result as a CSV file.

We have found 13 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 0.015s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi3g1v0189300.1
n.a. Protein DETOXIFICATION; TAIR: AT3G21690.1 MATE efflux family protein; Swiss-Prot: sp|Q9LVD9|DTX40_ARATH Protein DETOXIFICATION 40; TrEMBL-Plants: tr|A0A0B2QIH9|A0A0B2QIH9_GLYSO Protein DETOXIFICATION; Found in the gene: LotjaGi3g1v0189300 LjG1.1_chr3 27173855 27187134 +
1 domain prediction
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LotjaGi3g1v0189300.2
n.a. Protein DETOXIFICATION; TAIR: AT3G21690.1 MATE efflux family protein; Swiss-Prot: sp|Q9LVD9|DTX40_ARATH Protein DETOXIFICATION 40; TrEMBL-Plants: tr|K7LTZ3|K7LTZ3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0189300 LjG1.1_chr3 27174007 27176498 +
1 domain prediction
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LotjaGi3g1v0189300.3
n.a. Protein DETOXIFICATION; TAIR: AT3G21690.1 MATE efflux family protein; Swiss-Prot: sp|Q9LVD9|DTX40_ARATH Protein DETOXIFICATION 40; TrEMBL-Plants: tr|A0A0B2QIH9|A0A0B2QIH9_GLYSO Protein DETOXIFICATION; Found in the gene: LotjaGi3g1v0189300 LjG1.1_chr3 27174007 27185745 +
1 domain prediction
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LotjaGi3g1v0189300.4
n.a. Protein DETOXIFICATION; TAIR: AT3G21690.1 MATE efflux family protein; Swiss-Prot: sp|Q9LVD9|DTX40_ARATH Protein DETOXIFICATION 40; TrEMBL-Plants: tr|A0A0B2QIH9|A0A0B2QIH9_GLYSO Protein DETOXIFICATION; Found in the gene: LotjaGi3g1v0189300 LjG1.1_chr3 27174007 27185745 +
1 domain prediction
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LotjaGi3g1v0189300.5
n.a. Protein DETOXIFICATION; TAIR: AT3G21690.1 MATE efflux family protein; Swiss-Prot: sp|Q9LVD9|DTX40_ARATH Protein DETOXIFICATION 40; TrEMBL-Plants: tr|A0A0R4J4K4|A0A0R4J4K4_SOYBN Protein DETOXIFICATION; Found in the gene: LotjaGi3g1v0189300 LjG1.1_chr3 27177614 27185745 +
1 domain prediction
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LotjaGi3g1v0189400.1
n.a. Protein DETOXIFICATION; TAIR: AT3G21690.1 MATE efflux family protein; Swiss-Prot: sp|Q9LVD9|DTX40_ARATH Protein DETOXIFICATION 40; TrEMBL-Plants: tr|A0A0B2QIH9|A0A0B2QIH9_GLYSO Protein DETOXIFICATION; Found in the gene: LotjaGi3g1v0189400 LjG1.1_chr3 27225404 27232992 +
1 domain prediction
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LotjaGi3g1v0189400.2
n.a. Protein DETOXIFICATION; TAIR: AT3G21690.1 MATE efflux family protein; Swiss-Prot: sp|Q9LVD9|DTX40_ARATH Protein DETOXIFICATION 40; TrEMBL-Plants: tr|K7LTZ3|K7LTZ3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0189400 LjG1.1_chr3 27225511 27227153 +
1 domain prediction
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LotjaGi3g1v0189400.3
n.a. Protein DETOXIFICATION; TAIR: AT3G21690.1 MATE efflux family protein; Swiss-Prot: sp|Q9LVD9|DTX40_ARATH Protein DETOXIFICATION 40; TrEMBL-Plants: tr|A0A0B2QIH9|A0A0B2QIH9_GLYSO Protein DETOXIFICATION; Found in the gene: LotjaGi3g1v0189400 LjG1.1_chr3 27225511 27232047 +
1 domain prediction
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LotjaGi3g1v0190100.1
n.a. Protein DETOXIFICATION; TAIR: AT3G21690.1 MATE efflux family protein; Swiss-Prot: sp|Q9LVD9|DTX40_ARATH Protein DETOXIFICATION 40; TrEMBL-Plants: tr|K7LTZ3|K7LTZ3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0190100 LjG1.1_chr3 27349937 27351612 -
1 domain prediction
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LotjaGi3g1v0465700.1
n.a. Protein DETOXIFICATION; TAIR: AT3G21690.1 MATE efflux family protein; Swiss-Prot: sp|Q9LVD9|DTX40_ARATH Protein DETOXIFICATION 40; TrEMBL-Plants: tr|A0A0B2QIH9|A0A0B2QIH9_GLYSO Protein DETOXIFICATION; Found in the gene: LotjaGi3g1v0465700 LjG1.1_chr3 88109742 88114070 -
1 domain prediction
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LotjaGi3g1v0465700.2
n.a. Protein DETOXIFICATION; TAIR: AT3G21690.1 MATE efflux family protein; Swiss-Prot: sp|Q9LVD9|DTX40_ARATH Protein DETOXIFICATION 40; TrEMBL-Plants: tr|A0A0B2QIH9|A0A0B2QIH9_GLYSO Protein DETOXIFICATION; Found in the gene: LotjaGi3g1v0465700 LjG1.1_chr3 88110177 88114058 -
1 domain prediction
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LotjaGi3g1v0465700.3
n.a. Protein DETOXIFICATION; TAIR: AT3G21690.1 MATE efflux family protein; Swiss-Prot: sp|Q9LVD9|DTX40_ARATH Protein DETOXIFICATION 40; TrEMBL-Plants: tr|K7LTZ3|K7LTZ3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0465700 LjG1.1_chr3 88110471 88113865 -
1 domain prediction
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LotjaGi3g1v0465800.1
n.a. Protein DETOXIFICATION; TAIR: AT3G21690.1 MATE efflux family protein; Swiss-Prot: sp|Q9LVD9|DTX40_ARATH Protein DETOXIFICATION 40; TrEMBL-Plants: tr|A0A0B2S7M3|A0A0B2S7M3_GLYSO Protein DETOXIFICATION; Found in the gene: LotjaGi3g1v0465800 LjG1.1_chr3 88122785 88127905 -
1 domain prediction
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