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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0465800 |
| Transcript ID | LotjaGi3g1v0465800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein DETOXIFICATION; TAIR: AT3G21690.1 MATE efflux family protein; Swiss-Prot: sp|Q9LVD9|DTX40_ARATH Protein DETOXIFICATION 40; TrEMBL-Plants: tr|A0A0B2S7M3|A0A0B2S7M3_GLYSO Protein DETOXIFICATION; Found in the gene: LotjaGi3g1v0465800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:88122785..88127905) extracted from Lotus japonicus Gifu genome v1.2.
TAAAGGGAAGGGGTCAAGTGATGTCGTTTTTTGTCTTATCCTCACAAATAAATACTCTTGAAAGCTGCAATATACACACC ATTTGTTTGTAATCACTAAGCCTCAAAGACATAGCCTCGCAAGGCTCCCTGCACAACAATTCACAAACTTCCACATGGGT TCTCCTAAGCAAAAAGATGTAGATCATGGTCAACCACCTTTGCTAGAGCTTAATGACCACCCACCACCACCATTGCCGCT GTCGTTTGCTGATTCATTCAGCGTGAAGCATGAAGGATCAGACGGTGAGCTTGAGCGAATACTCTCAGACACGAGCGTCC CTTTTGCAAAGCGTTATGGATCTGCAACATGGATTGAGCTCAAGCTCTTGATTTACCTTGCTGCTCCTGCTGTCATAGTG TACCTCATCAACTATGTCATGTCCATGTCCACTCAAATCTATTCAGGCCACTTGGGAAACCTTGAGCTAGCTGCGGCTTC CCTTGGAAACAATGGTATCCAAGTCTTCGCTTATGGCCTCATGGTACGTATTCACTATTCACCTTTGGAAACCTTATTCA ACGTATTATAAGTAGATGTTTAGATACAATAAGCTAAAGTGGCCATTTGGATTTTCGCTTGAAACATGATATTTAAATTA ACGTGATTTTAATAACGTGATTTTTGTAAAGTTGTATTGGAATAAATATAGTTTATGTTTGGATGATTTGTAACAAACGT GATTATGAAAAAATGAACTTTATTTTGGGTTATTTTAATCAAATCCACGTTTGGGTGATATCAAAAATAATTTTTAAAGA AATTATGCAATTTGGTGAGAAAAATATTAAAAAAAAAATCTAAAACTCAGTTTTGAACATTGCAATTTGGTGTAAGAGGA GAAGAGGAACAATAGTCCAAGAAGAAGCATTTTGTTCTTGACACCGACCAATTTACGCGACGAATATTGAAATTTGGTGA GCCAATCTTTCTCTCCAATGAATGATGTTGAAAAAAAAAACTTGACAAACCAAATAGATAAGATGGAAAATGAACAAAGA ATCAGAGCAAACAAACAGATTTGAACCATGGACAGAGCCGCAGATCTAACCCCGCTGATATGCGTTGGTGCGTTTTCAAA AACGTATAATCAAACAGGTAAAAAGAAGGGGTGGACCACGTTATTGCAAACACAACGCGCGTCATGTGCCTTCAACGCTA ACCCAAACAGAGCCAAAATTAGGTTGGAAAGAAGCAAATGTCAATTTGTGTTGATGCAAATGTGAAACCAATAAAAATAA AAGGTTAGGGTGATTGATCCATGACACATTAAGTGCGTGTTTAGATATTTTTTTGGGTACATAAGTGATAAGTGTGTGTG TGTTTAATTAGATAATGTTAATGCATGAAGATTTTATTTTTATAAGCCAAATTTATTTTAAAAAAAATATAAGTGGTACT TCAAACCCGTATACATACAAGATTGGAGAAAGTAAATAATATAGAAAGCAGACATATTAAAACTACAAAGTTTAGGGTCT ACGGTTTAAACATTTTTTTTTGGAATGCAAAAATTGTATTATTAAATGGGGCACAATTGGTGCCCCACACCAGATTACAG AAGAAGGGGGAAAAAATGACGGGGGACGAAACAGGGAATGGGAATTTACAAGAGAAATCAAAACAAAAGAAGCCTACAAA ACCCACAAGGACTAGGACCAGACCCCATGCTGCACAGAAGTGATATCAGCGACCCTAACCTTCATCAAATAGTGCAGCCT CAGTAGACACAAAAACAGCCTCAGCCTTAAAGGAGACCCAGTCCCAAACACATCTTTGGGTTCCAAAACCATTCGAAAAA GGAGCAATGAAAATCCTTAATTATTTTTGCTTTTGAGCCATTTCCAGGATCTGAAAATAAGTACCTTCAACTCAAATCTT TGAAAAGAGTAACCACTGCAATTGTAGATCCTGTTCATGATCCAGACCTAGAATTGCATGTATTATATATCTTAATTTAA TGTACCACACATTCTCTTTATATGTGTTTTAGAAATATTAATGATTTCTCTATCATCTAGCTCTTAGCTTGTCAATGAAA TCAGAGTGTGAACAAATTATTTTTTTATTATTCTAGTATCTTCTGATTTATCTTTTTATATGTTAACCGTTAACCTTTTT AAGTCACATTTAAAAATATTGTGACAACATGTTTGAGAGTTTAAGTTTCACATTCAGTTGAATGCAATATTGACCTTATA AACAAAGTCAAATCAATCCGACCTAGCTTTTCCGTTGAAAGTTGACAACTTTTACCATTTACTCACTTGACAATCATCTA AACAAGATTTATTTTGTATCCAAACATAAATCACATTATAATAAGTCATTTTTAATCCTACTTCGTTTTCTAAACTCAAG TTGACAAACACAATTTTCATAAATTTTAACTCAAAAACCAAAAATGCTTCGTGTAAACTTATTTTGTATTAACTTTGAAT TTGTGTCAGTTTCTATTCACCACAAATTGTGGTGCATGGTGTTTCCCAGTATTCTGTTGTACACAAATGAGCTTTGTTCA ATTACACACTTAATTTTTACATTTTGATTAATAGTTGGGCATGGGGAGTGCTGTTGAAACACTATGCGGACAAGCATACG GTGCAAGAAAGTTCGAGATGCTAGGCATATACATGCAAAGATCAATCATTCTTCTCTCACTAGCCGGAGTCGTTTTAACA ATAATCTACATCTTCTGTGAGCCCATCTTGATCTTCTTAGGAGAATCCCCAAGAATCGCAAAAGCAGCAACACTCTTCGT CTATGGCCTCATCCCTCAAATCTTCGCCTACAGCTTAAACTTCCCTATCCAGAAATTCTTACAAGCACAGAGCATAGTTG CTCCAAGTGCATACATCTCATCAGCGACGTTGGTCCTGCATCTCGTCCTAAGCTACGTCGTGGTCTACGCGCTCAAGCTC GGGTTGTTGGGCGCGTCTCTAATGTTGAGCGCGTCATGGTGGATCGTAGTGATTGGGCAGTTTGTGTACATTGTGAAGAG TGAGAGGTGCAGACACACATGGAAAGGGTTCACGGTTCAAGCGTTTTCTGGGTTGCCACAGTTGTTCAAGCTATCTGCGG CATCTGCAGTTATGTTATGCCTCGAGACGTGGTACTTTCAGATCCTGGTTTTGCTTGCTGGGCTCCTTCCTCATCCGGAG TTGGCTTTGGATTCACTTTCTATTTGGTAAGGTTTGTTTATGTTGTTTCTAGCCTTTTTTTAAGCATTCCAGATTAATAT AGAAGTAGTTTTTGAGGCAAAAGTTTTCCCATTTGAAAAGGAGCTTTTTAACTTATTACTTCATCCATTCCTTTTTCATA ATATATCCCTAGAAACATTTTTTGTATTCCTTAAATATAAGATTCACTACTAAATTTTTGAAAAAAATTACTCCCTCCGT TCCAAAACTATTGTAGTTTTAGTTTTTTCACTAAGTTTAAGAGTTCATTAATTGATGTTATAATTTGACTGAAACACCCT TCTTTAATATGAGTTATATGAAAGAGAGAGAATGAAAATCATTGGCTAACTAATTGGTGAGAATTGTGATTGGTGGAAAT AAGATGTGGTACTTAAGAGATACAATATTAAATGAAGGCATGAATGAAAGAGAATGAGATAAAGTGCTTTGAAAATATAA AACAACAATGGTTTTGGAACAAAACAAAAAAGTTAAAACTACAAATTAATACTCCCTCCGTTCCTTATTAACTGTCAACT TTGAAGAAAAAATTGTGTTCCTATATATCTGTCCACTTAGAGTTTCAAGAGAGCATTAATTGATGTTTTTCCAAGAAATG CCCTTACAGAAACAATAAATGAAGAAAGATAAAATACATTCTAAAGGGTTATATAGGATAACAAATAATATTTTTATGAA AATCAACACAATTAATTGTTTTCCATAATTTATGTGAACCTTTTCTTCCTGAATAGATAAATAGTAACAGATGGAGTAGT TTTTTCATATTATCTTGTATTAATTGTGTTTCTTTGAGTTGACTATGTACATTTTTTAGCACCTCCAGTGCTCCTATATA TACTATTAATTGGCTTATCCAAAAAAATCTTGTATTAATTGTTTTTTAATTTCCAAATATTGATTACCACCAGCATTAAT TCTCTCTCATGTTATTCATTCAAGTCATTTATAGTGAGTAACAATTAATACAATAATAGGGTAACTACGGAATATTGTAA ATATTTTTTAAAATTAATAAATTTGATTCATTACATTTTTTTTAGGAAGCGAAAGAGATCTTAAAGAAAAACAAAGAGAA TATTATACACTGGTGTGGGCCATTTCAATATTTTCTAAAACACCATCGTATTATTATTTTTTAAATTACTACTTTATCAT GGGTCATTTAGACATCCCCTACTTATTAATAAAGCTACTATTAAGTTAGGACTCATGAAATTTCTTACTTTTTATTATTC AATCTGTAATTTTTACTTGTTATATTCTAACTGTATTTTTAATTATATTGCAGTACCACATTGTCTGGATACGTGTTCAT GATTTCAGTTGGATTCAATGCAGCTGCGAGGTTTGATTCTCCCACTTTGTTATGTAGTGCTGGAAATTGAAATAATTAGT GATTTATGATTTGAATGATCTTGATGCAGTGTGAGAGTGAGCAATGAGCTGGGGTCAAGAAATCCAAAATCAGCCTCATT TTCAGTGGTGGTGGTGACAACGCTTTCTTTCATAATATCAGTTATTGAAGCACTTGCGGTGCTTGTGTTGCGAGATGTGA TCAGCTATGTCTTCACGGACGGTGAAGAGGTTGCGGCTGCTGTCTCAGACCTCTGTCCTCTCCTCGCTCTAGCCATTGTC CTCAACGGCATTCAACCTGTCTTATCCGGTAAGTAACTTCAATTCTATGATCAATGACAAATCCATGAATTTTAGAAAAT TTGAAACTTGTAGAATAACATGTATGAATGTATATGTAGGTGTGGCCGTTGGATGTGGATGGCAAACTTTTGTTGCGTAT GTGAACGTTGGTTGTTATTATGGAATTGGCATACCATTTGGTGCAGTTCTTGGTTTCTACTTCAAATTTGGTGCTAAGGT A
CDS sequence (LotjaGi3g1v0465800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTTCTCCTAAGCAAAAAGATGTAGATCATGGTCAACCACCTTTGCTAGAGCTTAATGACCACCCACCACCACCATT GCCGCTGTCGTTTGCTGATTCATTCAGCGTGAAGCATGAAGGATCAGACGGTGAGCTTGAGCGAATACTCTCAGACACGA GCGTCCCTTTTGCAAAGCGTTATGGATCTGCAACATGGATTGAGCTCAAGCTCTTGATTTACCTTGCTGCTCCTGCTGTC ATAGTGTACCTCATCAACTATGTCATGTCCATGTCCACTCAAATCTATTCAGGCCACTTGGGAAACCTTGAGCTAGCTGC GGCTTCCCTTGGAAACAATGGTATCCAAGTCTTCGCTTATGGCCTCATGTACCACATTGTCTGGATACGTGTTCATGATT TCAGTTGGATTCAATGCAGCTGCGAGTGTGAGAGTGAGCAATGA
Protein sequence (LotjaGi3g1v0465800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGSPKQKDVDHGQPPLLELNDHPPPPLPLSFADSFSVKHEGSDGELERILSDTSVPFAKRYGSATWIELKLLIYLAAPAV IVYLINYVMSMSTQIYSGHLGNLELAAASLGNNGIQVFAYGLMYHIVWIRVHDFSWIQCSCECESEQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 25 | 25 | - | – | |
| Phobius | 1 | 70 | 70 | - | – | |
| PANTHER | 22 | 124 | 103 | 2.6E-51 | – | |
| PANTHER | 22 | 124 | 103 | 2.6E-51 | – | |
| TMHMM | 69 | 91 | 23 | - | – | |
| Phobius | 71 | 89 | 19 | - | – | |
| Phobius | 90 | 147 | 58 | - | – | |
| TMHMM | 106 | 128 | 23 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0465800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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