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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • PTHR15288:SF4
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

Export options

Download the entire search result as a CSV file.

We have found 9 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 0.018s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0075129.1
n.a. DENN domain-containing protein isoform 3, partial [Theobroma cacao] gi|508783029|gb|EOY30285.1| chr0 28448537 28451397 +
1 domain prediction
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Lj0g3v0075149.1
n.a. DENN domain-containing protein isoform 1 [Theobroma cacao] gi|508783027|gb|EOY30283.1| chr0 28454876 28460045 +
1 domain prediction
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Lj4g3v2180400.1
n.a. Os02g0777100 [Oryza sativa Japonica Group] gi|115449019|ref|NP_001048289.1| chr4 30211244 30222032 -
1 domain prediction
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Lj4g3v2180400.2
n.a. DENN domain-containing protein isoform 3, partial [Theobroma cacao] gi|508783029|gb|EOY30285.1| chr4 30214919 30222032 -
1 domain prediction
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Lj6g3v1191160.1
n.a. DENN domain-containing protein isoform 1 [Theobroma cacao] gi|508783027|gb|EOY30283.1| chr6 14681541 14692668 -
1 domain prediction
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Lj6g3v1191160.3
n.a. DENN domain-containing protein isoform 1 [Theobroma cacao] gi|508783027|gb|EOY30283.1| chr6 14682808 14693145 -
1 domain prediction
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Lj6g3v1201180.1
n.a. DENN domain-containing protein isoform 1 [Theobroma cacao] gi|508783027|gb|EOY30283.1| chr6 14787704 14799070 +
1 domain prediction
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LotjaGi1g1v0702500.1
n.a. DENN domain containing protein, expressed; TAIR: AT2G20320.1 DENN (AEX-3) domain-containing protein; Swiss-Prot: sp|Q6NXD8|DEN5B_DANRE DENN domain-containing protein 5B; TrEMBL-Plants: tr|K7MYT4|K7MYT4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0702500 LjG1.1_chr1 127078170 127086977 -
1 domain prediction
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LotjaGi1g1v0702500.2
n.a. DENN domain containing protein, expressed; TAIR: AT2G20320.1 DENN (AEX-3) domain-containing protein; Swiss-Prot: sp|Q8SXT3|HFW2_DROME Protein singed wings 2; TrEMBL-Plants: tr|K7MYT4|K7MYT4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0702500 LjG1.1_chr1 127078813 127080000 -
1 domain prediction
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