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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0702500 |
| Transcript ID | LotjaGi1g1v0702500.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | DENN domain containing protein, expressed; TAIR: AT2G20320.1 DENN (AEX-3) domain-containing protein; Swiss-Prot: sp|Q8SXT3|HFW2_DROME Protein singed wings 2; TrEMBL-Plants: tr|K7MYT4|K7MYT4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0702500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:127078813..127080000) extracted from Lotus japonicus Gifu genome v1.2.
GCTTGGTACACTTTAGTTATTTTGAAATATCTTAAGCTCTCTATGTTCCAAAATTTGGGCTTGAATATACACACACACAC ATATATATAGACTGCATATTTGAACAAGCAAATTCTTGAACAAGCTTATTAACAAGGGGACAACATAATGTTGAACTTTT CTTTCATATTTCTGTTCCATTTCATGCTTTTGTTTTTCTCTTTATGTAGGTTAAAATGTGTCATTTGCCAAGACTTCCAC AGTATAAAGAGCTTGTCTCTCAATTAGGACCAATTCATGCCAAACTTTCAAGGGAAAGTTCAATTGCTCAAAAGCATCCA ATACATAGGTGCAACGAAGTACAGGTTTTTTAATTCCCATACTTAAATGCTTCTCTCTCTCTCTCTCTCTCCCTCCCTCT CTCAATTTTGGGAAAAAATTATTATTTAATCTATGGATAATTCATGCATCACAAACCAGCACAGTTTTTCTGCTTCTAGC CTCTGATGCATCTTTTACCAGTGGCACTTGCTAAGTTGTACTTGACTACTTGTTTGCAGGCTGAAGCTGCAACTCAGTTT CTGAATATCATGTGGCATTATCTGGAGTCACTTTGTTCTGAACTGAAATTTCATACAATAACTAGTGTACAATCAAACAA TGACAGGGTAACATAACTAAATCATTGCTTATTCTTTGTAATCCTGAAAATTCTCAAATAAATAAGTAGTTTGTCCACCT TTTTCTAACTCACCCAGGACTATTTTTCAGGTTTCTTTACTTCTTAAAGATAGCTTCATCGATTCCTTTCCTATTAGGGA CCAACCATTCATTAAGGTAACATCATTTTCTTCTTTTAAAGAAAAATCATAGAAAATTTTCATTTTACATGATCTTTGAA ATGATTGTTACAAATACTTGCACATGTTGCCATCTTTTAAAAATAAAATCTGACTGGTGTATATTTAACATTTCAATTAA GGGTGAAGAAAAAAAAGCATTTTCAAATAAAAAACCTTTAATTTTTGTTTTCATTTTTATGCTGAAGCAACATAGTTCCT AGTGAGACCGAGAAGCTTTTTAATGGCTTCTTTTGAAAGCTATTGATTATGATTTGAGTCATTGGTTTTGCAGCTATTTG TAGATACACAACTCTTCACTGTTTTATCAGACACTCGTCTATCAAGCTTTGAGAGTGGCGAGTCATAG
CDS sequence (LotjaGi1g1v0702500.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTGTCATTTGCCAAGACTTCCACAGTATAAAGAGCTTGTCTCTCAATTAGGACCAATTCATGCCAAACTTTCAAGGGA AAGTTCAATTGCTCAAAAGCATCCAATACATAGGTGCAACGAAGTACAGGCTGAAGCTGCAACTCAGTTTCTGAATATCA TGTGGCATTATCTGGAGTCACTTTGTTCTGAACTGAAATTTCATACAATAACTAGTGTACAATCAAACAATGACAGGGTT TCTTTACTTCTTAAAGATAGCTTCATCGATTCCTTTCCTATTAGGGACCAACCATTCATTAAGCTATTTGTAGATACACA ACTCTTCACTGTTTTATCAGACACTCGTCTATCAAGCTTTGAGAGTGGCGAGTCATAG
Protein sequence (LotjaGi1g1v0702500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MCHLPRLPQYKELVSQLGPIHAKLSRESSIAQKHPIHRCNEVQAEAATQFLNIMWHYLESLCSELKFHTITSVQSNNDRV SLLLKDSFIDSFPIRDQPFIKLFVDTQLFTVLSDTRLSSFESGES
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 4 | 121 | 118 | 1.0E-48 | – | |
| PANTHER | 4 | 121 | 118 | 1.0E-48 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0702500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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