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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • PTHR19878:SF17
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

Export options

Download the entire search result as a CSV file.

We have found 5 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 0.015s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi2g1v0399300.2
n.a. Transducin/WD40 repeat-like superfamily protein; TAIR: AT3G50590.1 Transducin/WD40 repeat-like superfamily protein; Swiss-Prot: sp|P39706|SWD1_YEAST COMPASS component SWD1; TrEMBL-Plants: tr|A0A1J7G317|A0A1J7G317_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0399300 LjG1.1_chr2 89622984 89626556 +
1 domain prediction
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LotjaGi2g1v0399300.3
n.a. Transducin/WD40 repeat-like superfamily protein; TAIR: AT3G50590.2 Transducin/WD40 repeat-like superfamily protein; Swiss-Prot: sp|P39706|SWD1_YEAST COMPASS component SWD1; TrEMBL-Plants: tr|I1K1T0|I1K1T0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0399300 LjG1.1_chr2 89622984 89634941 +
1 domain prediction
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LotjaGi2g1v0399300.4
n.a. Transducin/WD40 repeat-like superfamily protein; TAIR: AT3G50590.2 Transducin/WD40 repeat-like superfamily protein; Swiss-Prot: sp|P39706|SWD1_YEAST COMPASS component SWD1; TrEMBL-Plants: tr|I1K1T0|I1K1T0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0399300 LjG1.1_chr2 89622984 89635050 +
1 domain prediction
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LotjaGi4g1v0107000.7
n.a. Transducin/WD40 repeat-like superfamily protein; TAIR: AT3G50590.2 Transducin/WD40 repeat-like superfamily protein; Swiss-Prot: sp|P39706|SWD1_YEAST COMPASS component SWD1; TrEMBL-Plants: tr|G7LGE3|G7LGE3_MEDTR Transducin/WD40 repeat protein; Found in the gene: LotjaGi4g1v0107000 LjG1.1_chr4 15008616 15018567 -
1 domain prediction
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LotjaGi4g1v0107000.8
n.a. Transducin/WD40 repeat-like superfamily protein; TAIR: AT3G50590.1 Transducin/WD40 repeat-like superfamily protein; Swiss-Prot: sp|P39706|SWD1_YEAST COMPASS component SWD1; TrEMBL-Plants: tr|A0A0S3R514|A0A0S3R514_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0107000 LjG1.1_chr4 15014049 15018567 -
1 domain prediction
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