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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • PTHR24412
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 45 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 0.027s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0055609.1
n.a. PREDICTED: F-box/kelch-repeat protein At3g27150-like [Cicer arietinum] gi|502167348|ref|XP_004514113.1| chr0 17963083 17965037 -
1 domain prediction
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Lj0g3v0057049.1
n.a. PREDICTED: F-box/kelch-repeat protein At1g55270-like [Glycine max] gi|356511684|ref|XP_003524553.1| chr0 18619009 18622036 +
1 domain prediction
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Lj0g3v0065449.1
n.a. PREDICTED: BTB/POZ domain-containing protein POB1-like [Glycine max] gi|356560627|ref|XP_003548592.1| chr0 22759327 22759643 +
1 domain prediction
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Lj0g3v0065459.1
n.a. POZ/BTB containin G-protein 1 isoform 5 [Theobroma cacao] gi|508703913|gb|EOX95809.1| chr0 22760228 22760981 +
1 domain prediction
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Lj0g3v0122919.1
n.a. POZ/BTB containin G-protein 1 isoform 5 [Theobroma cacao] gi|508703913|gb|EOX95809.1| chr0 54981116 54982389 -
1 domain prediction
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Lj0g3v0122929.1
n.a. POZ/BTB containin G-protein 1 isoform 5 [Theobroma cacao] gi|508703913|gb|EOX95809.1| chr0 54981116 54982108 -
1 domain prediction
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Lj0g3v0122939.1
n.a. POZ/BTB containin G-protein 1 isoform 4 [Theobroma cacao] gi|508703912|gb|EOX95808.1| chr0 54982499 54983466 -
1 domain prediction
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Lj0g3v0122939.2
n.a. PREDICTED: BTB/POZ domain-containing protein POB1-like [Glycine max] gi|356506034|ref|XP_003521793.1| chr0 54982499 54983466 -
1 domain prediction
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Lj0g3v0135349.1
n.a. POZ/BTB containin G-protein 1 isoform 5 [Theobroma cacao] gi|508703913|gb|EOX95809.1| chr0 62164530 62166775 -
1 domain prediction
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Lj0g3v0188989.1
n.a. POZ/BTB containin G-protein 1 isoform 1 [Theobroma cacao] gi|508703909|gb|EOX95805.1| chr0 92398759 92399808 +
1 domain prediction
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Lj0g3v0188989.2
n.a. BTB domain protein [Nicotiana benthamiana] gi|320526044|gb|ADW41580.1| chr0 92399116 92399808 +
1 domain prediction
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Lj0g3v0188999.1
n.a. PREDICTED: BTB/POZ domain-containing protein POB1-like [Fragaria vesca subsp]. vesca] gi|470141990|ref|XP_004306705.1| chr0 92400234 92400525 +
1 domain prediction
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Lj0g3v0193919.2
n.a. PREDICTED: BTB/POZ domain-containing protein POB1-like [Glycine max] gi|356506034|ref|XP_003521793.1| chr0 94645485 94647803 +
1 domain prediction
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Lj0g3v0263709.1
n.a. n.a. chr0 136696334 136698107 +
1 domain prediction
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Lj0g3v0276389.1
n.a. PREDICTED: BTB/POZ domain-containing protein POB1-like [Glycine max] gi|356573187|ref|XP_003554745.1| chr0 143418008 143418952 -
1 domain prediction
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Lj0g3v0288739.1
n.a. PREDICTED: BTB/POZ domain-containing protein POB1-like [Glycine max] gi|356506034|ref|XP_003521793.1| chr0 150021289 150021753 +
1 domain prediction
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Lj0g3v0288749.1
n.a. POZ/BTB containin G-protein 1 isoform 5 [Theobroma cacao] gi|508703913|gb|EOX95809.1| chr0 150021816 150022484 +
1 domain prediction
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Lj0g3v0292259.1
n.a. POZ/BTB containin G-protein 1 isoform 5 [Theobroma cacao] gi|508703913|gb|EOX95809.1| chr0 151701564 151702258 +
1 domain prediction
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Lj0g3v0337169.1
n.a. Kelch-like protein [Medicago truncatula] gi|358346302|ref|XP_003637208.1| chr0 176568385 176569155 +
1 domain prediction
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Lj0g3v0339349.1
n.a. POZ/BTB containin G-protein 1 isoform 5 [Theobroma cacao] gi|508703913|gb|EOX95809.1| chr0 177746176 177748523 -
1 domain prediction
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Lj0g3v0339349.2
n.a. PREDICTED: BTB/POZ domain-containing protein POB1-like [Cicer arietinum] gi|502156968|ref|XP_004510713.1| chr0 177747512 177748480 -
1 domain prediction
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Lj1g3v2390160.1
n.a. Kelch-like protein [Medicago truncatula] gi|357506211|ref|XP_003623394.1| chr1 28158494 28160219 -
1 domain prediction
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Lj1g3v2390160.2
n.a. Kelch-like protein [Medicago truncatula] gi|357506211|ref|XP_003623394.1| chr1 28158815 28160219 -
1 domain prediction
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Lj1g3v3384760.1
n.a. PREDICTED: F-box/kelch-repeat protein At5g42350-like [Glycine max] gi|356508586|ref|XP_003523036.1| chr1 39007629 39010643 +
1 domain prediction
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Lj1g3v4482340.1
n.a. PREDICTED: F-box/kelch-repeat protein OR23-like [Glycine max] gi|356503594|ref|XP_003520592.1| chr1 52456889 52462841 -
1 domain prediction
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Lj1g3v5031310.1
n.a. PREDICTED: BTB/POZ domain-containing protein POB1-like [Glycine max] gi|356573187|ref|XP_003554745.1| chr1 61307207 61311791 -
1 domain prediction
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Lj2g3v1549980.1
n.a. PREDICTED: F-box/kelch-repeat protein SKIP25-like [Cicer arietinum] gi|502162027|ref|XP_004512365.1| chr2 24474677 24476950 +
1 domain prediction
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Lj3g3v0042020.1
n.a. POZ/BTB containin G-protein 1 isoform 1 [Theobroma cacao] gi|508703909|gb|EOX95805.1| chr3 484528 486703 +
1 domain prediction
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Lj3g3v0042050.1
n.a. Kelch-like protein [Medicago truncatula] gi|358346302|ref|XP_003637208.1| chr3 489143 490536 -
1 domain prediction
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Lj3g3v2364160.1
n.a. POZ/BTB containin G-protein 1 isoform 5 [Theobroma cacao] gi|508703913|gb|EOX95809.1| chr3 29611767 29614791 +
1 domain prediction
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Lj3g3v3241050.1
n.a. PREDICTED: BTB/POZ domain-containing protein POB1-like [Glycine max] gi|356520334|ref|XP_003528818.1| chr3 39983559 39985080 +
1 domain prediction
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Lj3g3v3241050.2
n.a. PREDICTED: BTB/POZ domain-containing protein POB1-like [Glycine max] gi|356520334|ref|XP_003528818.1| chr3 39983559 39986633 +
1 domain prediction
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Lj3g3v3241060.1
n.a. PREDICTED: BTB/POZ domain-containing protein POB1-like [Glycine max] gi|356573187|ref|XP_003554745.1| chr3 39988451 39990314 +
1 domain prediction
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Lj3g3v3527490.1
n.a. POZ/BTB containin G-protein 1 isoform 5 [Theobroma cacao] gi|508703913|gb|EOX95809.1| chr3 43115959 43117392 -
1 domain prediction
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Lj3g3v3527550.2
n.a. PREDICTED: BTB/POZ domain-containing protein POB1-like [Glycine max] gi|356573187|ref|XP_003554745.1| chr3 43159388 43160684 -
1 domain prediction
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Lj3g3v3678730.1
n.a. POZ/BTB containin G-protein 1 isoform 5 [Theobroma cacao] gi|508703913|gb|EOX95809.1| chr3 44697244 44697961 +
1 domain prediction
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Lj3g3v3688840.1
n.a. PREDICTED: BTB/POZ domain-containing protein POB1-like [Cicer arietinum] gi|502156968|ref|XP_004510713.1| chr3 44740225 44741652 -
1 domain prediction
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Lj3g3v3711280.1
n.a. PREDICTED: BTB/POZ domain-containing protein POB1-like [Glycine max] gi|356506034|ref|XP_003521793.1| chr3 44953908 44960910 -
1 domain prediction
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Lj3g3v3737680.1
n.a. PREDICTED: BTB/POZ domain-containing protein POB1-like [Glycine max] gi|356506034|ref|XP_003521793.1| chr3 45197864 45198431 +
1 domain prediction
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Lj4g3v1877020.1
n.a. PREDICTED: F-box/kelch-repeat protein At1g55270-like [Glycine max] gi|356511684|ref|XP_003524553.1| chr4 25773175 25774446 +
1 domain prediction
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Lj4g3v2313710.1
n.a. Kelch-like protein diablo [Medicago truncatula] gi|357478787|ref|XP_003609679.1| chr4 32294542 32297173 +
1 domain prediction
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Lj4g3v2539170.1
n.a. PREDICTED: F-box/kelch-repeat protein At1g67480-like [Glycine max] gi|356525146|ref|XP_003531188.1| chr4 34144324 34146909 -
1 domain prediction
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Lj4g3v2603890.1
n.a. PREDICTED: F-box/kelch-repeat protein At1g55270-like [Cicer arietinum] gi|502140780|ref|XP_004504335.1| chr4 34965385 34969514 -
1 domain prediction
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Lj4g3v2603970.1
n.a. PREDICTED: F-box/kelch-repeat protein At2g44130-like [Cicer arietinum] gi|502140767|ref|XP_004504329.1| chr4 35001857 35003373 -
1 domain prediction
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Lj6g3v2055760.1
n.a. PREDICTED: kelch-like protein 8-like [Glycine max] gi|356549387|ref|XP_003543075.1| chr6 24315980 24317735 +
1 domain prediction
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