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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • PTHR27009
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 179 results. Now displaying 1 of 4 with 50 rows per page. This search has taken 0.039s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0009879.1
n.a. Kinase R-like protein [Medicago truncatula] gi|357438749|ref|XP_003589651.1| chr0 4084536 4084772 -
1 domain prediction
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Lj0g3v0009889.1
n.a. n.a. chr0 4084536 4084745 -
1 domain prediction
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Lj0g3v0009919.1
n.a. PREDICTED: probable receptor-like protein kinase At5g39030-like isoform X1 [Cicer arietinum] gi|502123880|ref|XP_004498296.1| chr0 4086106 4086900 +
1 domain prediction
 –
Lj0g3v0010059.1
n.a. LRR receptor-like serine/threonine-protein kinase ERL2 [Medicago truncatula] gi|357438689|ref|XP_003589621.1| chr0 4104560 4104877 -
1 domain prediction
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Lj0g3v0010069.1
n.a. PREDICTED: probable receptor-like protein kinase At5g39030-like isoform X2 [Cicer arietinum] gi|502123882|ref|XP_004498297.1| chr0 4105156 4105460 -
1 domain prediction
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Lj0g3v0010279.1
n.a. Kinase-like protein [Medicago truncatula] gi|357438737|ref|XP_003589645.1| chr0 4201445 4201553 -
1 domain prediction
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Lj0g3v0090919.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase B120-like isoform X1 [Cicer arietinum] gi|502124346|ref|XP_004498487.1| chr0 37590076 37591309 +
1 domain prediction
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Lj0g3v0090929.1
n.a. n.a. chr0 37590076 37593037 -
1 domain prediction
 –
Lj0g3v0098029.1
n.a. PREDICTED: probable receptor-like protein kinase At1g67000-like [Cicer arietinum] gi|502124158|ref|XP_004498410.1| chr0 41498065 41498634 -
1 domain prediction
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Lj0g3v0156639.1
n.a. PREDICTED: probable receptor-like protein kinase At5g39020-like [Cicer arietinum] gi|502124239|ref|XP_004498441.1| chr0 73430474 73430956 -
1 domain prediction
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Lj0g3v0184799.1
n.a. PREDICTED: probable serine/threonine-protein kinase At1g18390-like isoform X3 [Cicer arietinum] gi|502163640|ref|XP_004512901.1| chr0 89948836 89949656 -
1 domain prediction
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Lj0g3v0188629.1
n.a. PREDICTED: probable receptor-like protein kinase At1g67000-like [Glycine max] gi|356547470|ref|XP_003542135.1| chr0 92195595 92197659 +
1 domain prediction
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Lj0g3v0194239.1
n.a. PREDICTED: probable receptor-like protein kinase At5g39020-like [Cicer arietinum] gi|502124239|ref|XP_004498441.1| chr0 94769869 94770822 +
1 domain prediction
 –
Lj0g3v0196349.1
n.a. Ser/Thr protein kinase [Lotus japonicus] gi|62857020|dbj|BAD95895.1| chr0 95734995 95738080 -
1 domain prediction
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Lj0g3v0202799.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like isoform X2 [Cicer arietinum] gi|502124180|ref|XP_004498419.1| chr0 100410719 100411619 -
1 domain prediction
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Lj0g3v0204919.1
n.a. PREDICTED: probable receptor-like protein kinase At1g67000-like isoform X1 [Cicer arietinum] gi|502124182|ref|XP_004498420.1| chr0 101815926 101817781 -
1 domain prediction
 –
Lj0g3v0204929.1
n.a. PREDICTED: probable receptor-like protein kinase At5g39020-like [Cicer arietinum] gi|502124239|ref|XP_004498441.1| chr0 101818409 101818891 +
1 domain prediction
 –
Lj0g3v0209419.1
n.a. Protein kinase-coding resistance protein [Medicago truncatula] gi|357444671|ref|XP_003592613.1| chr0 105003666 105004254 +
1 domain prediction
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Lj0g3v0209839.1
n.a. PREDICTED: probable receptor-like protein kinase At5g39020-like [Cicer arietinum] gi|502124239|ref|XP_004498441.1| chr0 105358496 105359889 +
1 domain prediction
 –
Lj0g3v0216049.1
n.a. PREDICTED: probable receptor-like protein kinase At1g67000-like [Cicer arietinum] gi|502124172|ref|XP_004498416.1| chr0 109718282 109719039 -
1 domain prediction
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Lj0g3v0216059.1
n.a. PREDICTED: probable receptor-like protein kinase At1g67000-like [Cicer arietinum] gi|502124172|ref|XP_004498416.1| chr0 109718343 109719828 -
1 domain prediction
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Lj0g3v0216069.1
n.a. PREDICTED: probable receptor-like protein kinase At1g67000-like [Cicer arietinum] gi|502124172|ref|XP_004498416.1| chr0 109719183 109719828 -
1 domain prediction
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Lj0g3v0229589.1
n.a. PREDICTED: probable receptor-like protein kinase At1g67000-like [Solanum lycopersicum] gi|460387493|ref|XP_004239411.1| chr0 118892878 118894410 +
1 domain prediction
 –
Lj0g3v0229599.1
n.a. Kinase R-like protein [Medicago truncatula] gi|357444695|ref|XP_003592625.1| chr0 118894498 118895230 +
1 domain prediction
 –
Lj0g3v0237189.1
n.a. PREDICTED: probable receptor-like protein kinase At1g67000-like isoform X2 [Cicer arietinum] gi|502124184|ref|XP_004498421.1| chr0 122961277 122961699 -
1 domain prediction
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Lj0g3v0252559.1
n.a. stress-induced receptor-like kinase precursor [Glycine max] gi|351725323|ref|NP_001238112.1| chr0 130972525 130987837 -
1 domain prediction
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Lj0g3v0257879.1
n.a. PREDICTED: probable receptor-like protein kinase At5g39030-like isoform X2 [Cicer arietinum] gi|502123882|ref|XP_004498297.1| chr0 133904277 133909875 +
1 domain prediction
 –
Lj0g3v0257909.1
n.a. Kinase R-like protein [Medicago truncatula] gi|357438749|ref|XP_003589651.1| chr0 133912690 133915391 -
1 domain prediction
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Lj0g3v0257919.2
n.a. PREDICTED: probable receptor-like protein kinase At1g67000-like [Cicer arietinum] gi|502123870|ref|XP_004498292.1| chr0 133912738 133915391 -
1 domain prediction
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Lj0g3v0257929.1
n.a. PREDICTED: probable receptor-like protein kinase At5g39030-like isoform X2 [Cicer arietinum] gi|502123882|ref|XP_004498297.1| chr0 133915895 133916912 +
1 domain prediction
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Lj0g3v0264469.1
n.a. PREDICTED: probable receptor-like protein kinase At1g67000-like [Cicer arietinum] gi|502124351|ref|XP_004498489.1| chr0 137093886 137096143 +
1 domain prediction
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Lj0g3v0264479.1
n.a. PREDICTED: probable receptor-like protein kinase At5g39020-like [Cicer arietinum] gi|502124239|ref|XP_004498441.1| chr0 137103541 137104203 -
1 domain prediction
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Lj0g3v0274939.1
n.a. PREDICTED: probable receptor-like protein kinase At1g67000-like [Cicer arietinum] gi|502124172|ref|XP_004498416.1| chr0 142572810 142575191 +
1 domain prediction
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Lj0g3v0275209.1
n.a. PREDICTED: probable receptor-like protein kinase At1g67000-like [Cicer arietinum] gi|502124155|ref|XP_004498409.1| chr0 142749560 142751112 -
1 domain prediction
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Lj0g3v0275209.2
n.a. PREDICTED: probable receptor-like protein kinase At1g67000-like [Cicer arietinum] gi|502124155|ref|XP_004498409.1| chr0 142749560 142753392 -
1 domain prediction
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Lj0g3v0275219.1
n.a. PREDICTED: probable receptor-like protein kinase At1g67000-like [Vitis vinifera] gi|359490131|ref|XP_002279967.2| chr0 142753684 142755758 +
1 domain prediction
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Lj0g3v0275219.2
n.a. PREDICTED: probable receptor-like protein kinase At5g39030-like [Cicer arietinum] gi|502124236|ref|XP_004498440.1| chr0 142754773 142755758 +
1 domain prediction
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Lj0g3v0275229.1
n.a. PREDICTED: probable receptor-like protein kinase At5g39020-like [Glycine max] gi|356573827|ref|XP_003555057.1| chr0 142757370 142760533 -
1 domain prediction
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Lj0g3v0275229.2
n.a. PREDICTED: probable receptor-like protein kinase At1g67000-like [Cicer arietinum] gi|502124170|ref|XP_004498415.1| chr0 142757370 142760533 -
1 domain prediction
 –
Lj0g3v0275229.3
n.a. PREDICTED: probable receptor-like protein kinase At5g39020-like [Glycine max] gi|356573827|ref|XP_003555057.1| chr0 142757370 142761799 -
1 domain prediction
 –
Lj0g3v0275229.4
n.a. PREDICTED: probable receptor-like protein kinase At5g39020-like [Glycine max] gi|356573827|ref|XP_003555057.1| chr0 142757370 142761799 -
1 domain prediction
 –
Lj0g3v0280349.1
n.a. Kinase-like protein [Medicago truncatula] gi|357497897|ref|XP_003619237.1| chr0 145398995 145400678 -
1 domain prediction
 –
Lj0g3v0280349.2
n.a. PREDICTED: probable receptor-like protein kinase At1g67000-like isoform X1 [Cicer arietinum] gi|502124182|ref|XP_004498420.1| chr0 145398995 145400678 -
1 domain prediction
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Lj0g3v0280359.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase B120-like isoform X1 [Cicer arietinum] gi|502124346|ref|XP_004498487.1| chr0 145402763 145404138 +
1 domain prediction
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Lj0g3v0280369.1
n.a. Kinase-like protein [Medicago truncatula] gi|357497887|ref|XP_003619232.1| chr0 145407173 145407943 +
1 domain prediction
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Lj0g3v0294819.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like isoform X1 [Cicer arietinum] gi|502124177|ref|XP_004498418.1| chr0 153261726 153264510 -
1 domain prediction
 –
Lj0g3v0294819.3
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like isoform X1 [Cicer arietinum] gi|502124177|ref|XP_004498418.1| chr0 153261726 153264510 -
1 domain prediction
 –
Lj0g3v0294819.4
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like isoform X2 [Cicer arietinum] gi|502124180|ref|XP_004498419.1| chr0 153263003 153264510 -
1 domain prediction
 –
Lj0g3v0294829.1
n.a. Kinase-like protein [Medicago truncatula] gi|357497897|ref|XP_003619237.1| chr0 153264836 153267130 +
1 domain prediction
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Lj0g3v0297679.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like isoform X1 [Cicer arietinum] gi|502124177|ref|XP_004498418.1| chr0 154740552 154748264 +
1 domain prediction
 –