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Lj0g3v0204919.1

Overview

Field Value
Gene ID Lj0g3v0204919
Transcript ID Lj0g3v0204919.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: probable receptor-like protein kinase At1g67000-like isoform X1 [Cicer arietinum] gi|502124182|ref|XP_004498420.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius
NON_CYTOPLASMIC_DOMAIN
1 184 184 – –
PANTHER
PTHR27009
35 527 493 5.40E-201 –
PANTHER
PTHR27009:SF18
35 527 493 5.40E-201 –
TMHMM
TMhelix
183 205 23 – –
Phobius
TRANSMEMBRANE
185 205 21 – –
ProSiteProfiles
PS50011
205 499 295 36.414
IPR000719
SUPERFAMILY
SSF56112
206 484 279 4.51E-70
IPR011009
Phobius
CYTOPLASMIC_DOMAIN
206 527 322 – –
Pfam
PF00069
207 482 276 7.50E-45
IPR000719
Gene3D
G3DSA:3.30.200.20
211 267 57 3.60E-21 –
ProSitePatterns
PS00107
211 233 23 –
IPR017441
Gene3D
G3DSA:1.10.510.10
268 484 217 1.20E-40 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

Genome browser

LORE1 insertions 6

Expression data

Expression pattern

Expression pattern of Lj0g3v0204919.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0204919.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.