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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • PTHR31168:SF1
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

Export options

Download the entire search result as a CSV file.

We have found 7 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 0.013s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0187379.1
n.a. Uncharacterized protein isoform 2 [Theobroma cacao] gi|508773891|gb|EOY21147.1| chr0 91408477 91411321 -
1 domain prediction
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Lj0g3v0212869.1
n.a. Uncharacterized protein isoform 2 [Theobroma cacao] gi|508773891|gb|EOY21147.1| chr0 107402239 107404248 -
1 domain prediction
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Lj4g3v3113960.2
n.a. Uncharacterized protein isoform 2 [Theobroma cacao] gi|508773891|gb|EOY21147.1| chr4 41841393 41844162 -
1 domain prediction
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Lj4g3v3113980.1
n.a. Uncharacterized protein isoform 2 [Theobroma cacao] gi|508773891|gb|EOY21147.1| chr4 41844846 41851466 -
1 domain prediction
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Lj4g3v3113980.2
n.a. Uncharacterized protein isoform 2 [Theobroma cacao] gi|508773891|gb|EOY21147.1| chr4 41848161 41851466 -
1 domain prediction
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Lj5g3v0963210.1
n.a. Uncharacterized protein isoform 2 [Theobroma cacao] gi|508773891|gb|EOY21147.1| chr5 14889963 14890973 -
1 domain prediction
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LotjaGi1g1v0127800.1
n.a. transmembrane protein, putative (Protein of unknown function, DUF599); TAIR: AT5G24600.1 TRP-like ion channel protein (Protein of unknown function, DUF599); Swiss-Prot: sp|Q59068|CSX1B_METJA CRISPR-associated protein Csx1 2; TrEMBL-Plants: tr|A0A0B2S6W4|A0A0B2S6W4_GLYSO Uncharacterized protein; Found in the gene: LotjaGi1g1v0127800 LjG1.1_chr1 20404344 20406611 -
1 domain prediction
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