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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • PTHR31881:SF14
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

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Download the entire search result as a CSV file.

We have found 3 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 0.014s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi2g1v0169000.1
n.a. plant/protein (Protein of unknown function, DUF599); TAIR: AT4G31330.1 transmembrane protein, putative (Protein of unknown function, DUF599); Swiss-Prot: sp|Q9HH76|UPPS_SULAC Tritrans,polycis-undecaprenyl-diphosphate synthase (GGDP specific); TrEMBL-Plants: tr|I1NIF3|I1NIF3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0169000 LjG1.1_chr2 58197617 58201185 -
1 domain prediction
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LotjaGi5g1v0197800.1
n.a. plant/protein (Protein of unknown function, DUF599); TAIR: AT4G31330.1 transmembrane protein, putative (Protein of unknown function, DUF599); Swiss-Prot: sp|Q90953|CSPG2_CHICK Versican core protein; TrEMBL-Plants: tr|V7BDL9|V7BDL9_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0197800 LjG1.1_chr5 49403417 49416084 +
1 domain prediction
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LotjaGi5g1v0197800.2
n.a. plant/protein (Protein of unknown function, DUF599); TAIR: AT4G31330.1 transmembrane protein, putative (Protein of unknown function, DUF599); Swiss-Prot: sp|A3CWL3|COFC_METMJ 2-phospho-L-lactate guanylyltransferase; TrEMBL-Plants: tr|V7BDL9|V7BDL9_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0197800 LjG1.1_chr5 49403795 49410526 +
1 domain prediction
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