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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • PTHR32166
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 91 results. Now displaying 1 of 2 with 50 rows per page. This search has taken 0.036s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0039869.1
n.a. HAT family dimerization domain containing protein [Medicago truncatula] gi|357515439|ref|XP_003628008.1| chr0 12903958 12906277 +
1 domain prediction
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Lj0g3v0039879.1
n.a. Os02g0513700 [Oryza sativa Japonica Group] gi|297599295|ref|NP_001046945.2| chr0 12910854 12911666 +
1 domain prediction
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Lj0g3v0064299.1
n.a. DNA binding protein [Cucumis melo subsp]. melo] gi|307136239|gb|ADN34075.1| chr0 22126353 22128461 -
1 domain prediction
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Lj0g3v0077809.1
n.a. HAT family dimerization domain containing protein [Medicago truncatula] gi|357515439|ref|XP_003628008.1| chr0 29915770 29918231 -
1 domain prediction
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Lj0g3v0078339.1
n.a. hAT family dimerization domain-containing protein [Arabidopsis thaliana] gi|240256365|ref|NP_680299.4| chr0 30151044 30152932 +
1 domain prediction
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Lj0g3v0078389.1
n.a. hAT dimerisation domain-containing protein-like [Oryza sativa Japonica Group] gi|55297521|dbj|BAD68478.1| chr0 30168370 30171911 +
1 domain prediction
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Lj0g3v0085109.1
n.a. HAT transposon superfamily [Theobroma cacao] gi|508777206|gb|EOY24462.1| chr0 33990542 33991537 +
1 domain prediction
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Lj0g3v0085119.1
n.a. hAT transposon superfamily protein [Arabidopsis thaliana] gi|15218320|ref|NP_175015.1| chr0 33992111 33995540 +
1 domain prediction
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Lj0g3v0092579.1
n.a. HAT transposon superfamily [Theobroma cacao] gi|508777206|gb|EOY24462.1| chr0 38607126 38610611 -
1 domain prediction
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Lj0g3v0097269.1
n.a. HAT family dimerization domain containing protein [Medicago truncatula] gi|357515439|ref|XP_003628008.1| chr0 41081871 41082823 +
1 domain prediction
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Lj0g3v0101079.1
n.a. HAT family dimerization domain containing protein [Medicago truncatula] gi|357515439|ref|XP_003628008.1| chr0 42801660 42802031 +
1 domain prediction
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Lj0g3v0111149.1
n.a. hypothetical protein SORBIDRAFT_03g000360 [Sorghum bicolor] gi|242055793|ref|XP_002457042.1| chr0 48253388 48253699 +
1 domain prediction
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Lj0g3v0123199.1
n.a. PREDICTED: alanyl-tRNA synthetase-like [Vitis vinifera] gi|359489960|ref|XP_002269399.2| chr0 55230297 55235747 -
1 domain prediction
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Lj0g3v0124219.1
n.a. HAT family dimerization domain containing protein [Medicago truncatula] gi|357515439|ref|XP_003628008.1| chr0 55757381 55762042 -
1 domain prediction
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Lj0g3v0130079.1
n.a. n.a. chr0 58931896 58932775 -
1 domain prediction
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Lj0g3v0130089.1
n.a. F5O11.10 isoform 3 [Theobroma cacao] gi|508777239|gb|EOY24495.1| chr0 58933453 58934861 +
1 domain prediction
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Lj0g3v0138429.1
n.a. DNA binding protein [Cucumis melo subsp]. melo] gi|307136239|gb|ADN34075.1| chr0 63444412 63445038 +
1 domain prediction
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Lj0g3v0157469.1
n.a. Os02g0513700 [Oryza sativa Japonica Group] gi|297599295|ref|NP_001046945.2| chr0 73769585 73770397 +
1 domain prediction
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Lj0g3v0159329.1
n.a. HAT family dimerization domain containing protein [Medicago truncatula] gi|357515439|ref|XP_003628008.1| chr0 74669987 74670277 +
1 domain prediction
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Lj0g3v0166419.1
n.a. hAT family dimerization domain-containing protein [Arabidopsis thaliana] gi|240256365|ref|NP_680299.4| chr0 79152280 79153532 +
1 domain prediction
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Lj0g3v0192269.1
n.a. F5O11.10 isoform 3 [Theobroma cacao] gi|508777239|gb|EOY24495.1| chr0 93932147 93934506 +
1 domain prediction
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Lj0g3v0193039.1
n.a. hAT family dimerization domain-containing protein [Arabidopsis thaliana] gi|240256365|ref|NP_680299.4| chr0 94356883 94359766 -
1 domain prediction
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Lj0g3v0206749.1
n.a. hAT family dimerization domain-containing protein [Arabidopsis thaliana] gi|240256365|ref|NP_680299.4| chr0 103097239 103097793 +
1 domain prediction
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Lj0g3v0206749.2
n.a. hAT family dimerization domain-containing protein [Arabidopsis thaliana] gi|240256365|ref|NP_680299.4| chr0 103097264 103097793 +
1 domain prediction
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Lj0g3v0216799.1
n.a. hAT family dimerization domain-containing protein [Arabidopsis thaliana] gi|240256365|ref|NP_680299.4| chr0 110179571 110180171 +
1 domain prediction
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Lj0g3v0217289.1
n.a. hAT transposon superfamily protein [Arabidopsis thaliana] gi|15230674|ref|NP_187909.1| chr0 110535989 110537033 +
1 domain prediction
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Lj0g3v0219049.1
n.a. HAT dimerization domain-containing protein isoform 1 [Theobroma cacao] gi|508703524|gb|EOX95420.1| chr0 111801006 111801289 -
1 domain prediction
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Lj0g3v0235319.1
n.a. hAT dimerisation domain-containing protein -like [Oryza sativa Indica Group] gi|258644648|dbj|BAI39897.1| chr0 121942435 121943256 -
1 domain prediction
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Lj0g3v0267359.1
n.a. DNA binding protein [Cucumis melo subsp]. melo] gi|307136199|gb|ADN34037.1| chr0 138515358 138518530 -
1 domain prediction
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Lj0g3v0269309.1
n.a. hAT transposon superfamily protein [Arabidopsis thaliana] gi|15218320|ref|NP_175015.1| chr0 139510839 139516484 -
1 domain prediction
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Lj0g3v0269309.2
n.a. hAT family dimerization domain-containing protein [Arabidopsis thaliana] gi|240256365|ref|NP_680299.4| chr0 139510839 139511625 -
1 domain prediction
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Lj0g3v0273549.1
n.a. hAT family dimerisation domain containing protein [Oryza sativa Japonica Group] gi|77556044|gb|ABA98840.1| chr0 141797751 141799385 -
1 domain prediction
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Lj0g3v0274219.1
n.a. F5O11.10 isoform 3 [Theobroma cacao] gi|508777239|gb|EOY24495.1| chr0 142170379 142173552 -
1 domain prediction
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Lj0g3v0286059.1
n.a. HAT family dimerization domain containing protein [Medicago truncatula] gi|357515439|ref|XP_003628008.1| chr0 148566818 148566957 -
1 domain prediction
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Lj0g3v0318569.1
n.a. DNA binding protein [Cucumis melo subsp]. melo] gi|307136239|gb|ADN34075.1| chr0 166372454 166376354 -
1 domain prediction
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Lj0g3v0319489.1
n.a. DNA binding protein [Cucumis melo subsp]. melo] gi|307136239|gb|ADN34075.1| chr0 166790072 166793745 +
1 domain prediction
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Lj0g3v0341959.1
n.a. HAT family dimerization domain containing protein [Medicago truncatula] gi|357515439|ref|XP_003628008.1| chr0 179253270 179254712 +
1 domain prediction
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Lj0g3v0353549.1
n.a. hAT family dimerization domain-containing protein [Arabidopsis thaliana] gi|240256365|ref|NP_680299.4| chr0 186098604 186099649 -
1 domain prediction
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Lj1g3v0639770.1
n.a. HAT family dimerization domain containing protein [Medicago truncatula] gi|357515439|ref|XP_003628008.1| chr1 8285046 8288529 -
1 domain prediction
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Lj1g3v0933370.1
n.a. Protein dimerization [Medicago truncatula] gi|357463787|ref|XP_003602175.1| chr1 11716394 11720366 -
1 domain prediction
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Lj1g3v1526180.1
n.a. HAT family dimerization domain containing protein [Medicago truncatula] gi|357515439|ref|XP_003628008.1| chr1 18223362 18226009 +
1 domain prediction
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Lj1g3v1787970.1
n.a. HAT family dimerization domain containing protein [Medicago truncatula] gi|357515439|ref|XP_003628008.1| chr1 21295694 21296047 +
1 domain prediction
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Lj1g3v4106950.2
n.a. HAT family dimerization domain containing protein [Medicago truncatula] gi|357515439|ref|XP_003628008.1| chr1 48762260 48765462 -
1 domain prediction
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Lj2g3v0358970.1
n.a. DNA binding protein [Cucumis melo subsp]. melo] gi|307136239|gb|ADN34075.1| chr2 5740618 5742360 -
1 domain prediction
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Lj2g3v0776790.1
n.a. HAT family dimerization domain containing protein [Medicago truncatula] gi|357496671|ref|XP_003618624.1| chr2 12127064 12127558 +
1 domain prediction
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Lj2g3v0855360.1
n.a. n.a. chr2 13229208 13230889 -
1 domain prediction
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Lj2g3v2002620.1
n.a. F5O11.10 isoform 3 [Theobroma cacao] gi|508777239|gb|EOY24495.1| chr2 30388769 30392516 -
1 domain prediction
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Lj3g3v1403900.1
n.a. HAT family dimerization domain containing protein [Medicago truncatula] gi|357515439|ref|XP_003628008.1| chr3 17934901 17935804 -
1 domain prediction
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Lj4g3v1224880.1
n.a. hAT family dimerisation domain containing protein [Oryza sativa Japonica Group] gi|77551986|gb|ABA94783.1| chr4 18365187 18366125 -
1 domain prediction
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Lj4g3v1559430.1
n.a. hAT family dimerization domain-containing protein [Arabidopsis thaliana] gi|240256365|ref|NP_680299.4| chr4 23168271 23169523 +
1 domain prediction
 –