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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • PTHR33476:SF4
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 5 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 0.016s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj5g3v0626540.1
n.a. Os02g0795200 [Oryza sativa Japonica Group] gi|115449207|ref|NP_001048383.1| chr5 8380113 8383166 +
1 domain prediction
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LotjaGi1g1v0693100.1
n.a. POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND protein; TAIR: AT3G09730.3 POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND protein; Swiss-Prot: sp|Q6NQ99|POLAR_ARATH Protein POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND REDISTRIBUTION; TrEMBL-Plants: tr|K7LZM2|K7LZM2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0693100 LjG1.1_chr1 126093162 126096556 -
1 domain prediction
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LotjaGi1g1v0693100.2
n.a. POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND protein; TAIR: AT3G09730.3 POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND protein; Swiss-Prot: sp|Q6NQ99|POLAR_ARATH Protein POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND REDISTRIBUTION; TrEMBL-Plants: tr|K7LZM2|K7LZM2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0693100 LjG1.1_chr1 126093188 126096692 -
1 domain prediction
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LotjaGi5g1v0076100.1
n.a. POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND protein; TAIR: AT3G09730.3 POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND protein; Swiss-Prot: sp|Q6NQ99|POLAR_ARATH Protein POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND REDISTRIBUTION; TrEMBL-Plants: tr|A0A0B2SNY0|A0A0B2SNY0_GLYSO Uncharacterized protein; Found in the gene: LotjaGi5g1v0076100 LjG1.1_chr5 12531628 12534755 +
1 domain prediction
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LotjaGi5g1v0076100.2
n.a. POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND protein; TAIR: AT3G09730.1 POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND protein; Swiss-Prot: sp|Q6NQ99|POLAR_ARATH Protein POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND REDISTRIBUTION; TrEMBL-Plants: tr|A0A0B2SNY0|A0A0B2SNY0_GLYSO Uncharacterized protein; Found in the gene: LotjaGi5g1v0076100 LjG1.1_chr5 12531668 12534711 +
1 domain prediction
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