Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • SSF75704
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

Export options

Download the entire search result as a CSV file.

We have found 5 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 0.014s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj4g3v0002130.1
n.a. PREDICTED: intracellular protein transport protein USO1-like isoform X2 [Cicer arietinum] gi|502126589|ref|XP_004499365.1| chr4 122876 135981 +
1 domain prediction
 –
Lj4g3v0002130.2
n.a. PREDICTED: intracellular protein transport protein USO1-like isoform X2 [Cicer arietinum] gi|502126589|ref|XP_004499365.1| chr4 122876 138290 +
1 domain prediction
 –
Lj6g3v1444540.1
n.a. PREDICTED: CAP-Gly domain-containing linker protein 1-like [Cicer arietinum] gi|502085169|ref|XP_004487854.1| chr6 16994065 16996298 +
1 domain prediction
 –
LotjaGi4g1v0001500.1
n.a. Mitotic spindle assembly checkpoint protein MAD1; TAIR: AT5G49880.1 mitotic checkpoint family protein; Swiss-Prot: sp|Q9LTY1|MAD1_ARATH Mitotic spindle checkpoint protein MAD1; TrEMBL-Plants: tr|A0A0B2P2M0|A0A0B2P2M0_GLYSO Mitotic spindle assembly checkpoint protein MAD1; Found in the gene: LotjaGi4g1v0001500 LjG1.1_chr4 306718 321680 +
1 domain prediction
 –
LotjaGi6g1v0249000.1
n.a. Uveal autoantigen with coiled-coil domains and ankyrin repeats isoform 1; TAIR: AT4G15790.1 uveal autoantigen with coiled-coil/ankyrin; Swiss-Prot: sp|O42184|CLIP1_CHICK CAP-Gly domain-containing linker protein 1; TrEMBL-Plants: tr|I3SBH2|I3SBH2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0249000 LjG1.1_chr6 56117012 56120036 +
1 domain prediction
 –