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IPR001891

Description

IPR001891 is a Malic oxidoreductase.

<p>Malic enzymes (malate oxidoreductases) catalyse the oxidative decarboxylation of malate to form pyruvate, a reaction important in a number of metabolic pathways - e.g. carbon dioxide released from the reaction may be used in sugar production during the Calvin cycle of photosynthesis [[cite:PUB00002876]]. There are 3 forms of the enzyme [[cite:PUB00002681]]: an NAD-dependent form that decarboxylates oxaloacetate; an NAD-dependent form that does not decarboxylate oxalo-acetate; and an NADPH-dependent form. The malic enzyme from Bacillus stearothermophilus is NADPH-dependent, and also catalyses the decarboxylation of oxalacetate [[cite:PUB00057828]]. Other proteins known to be similar to malic enzymes are the Escherichia coli scfA protein; an enzyme from Zea mays (Maize), formerly thought to be cinnamyl-alcohol dehydrogenase [[cite:PUB00004541]]; and the hypothetical Saccharomyces cerevisiae protein YKL029c.</p> <p>Studies on the liver malic enzyme reveals that it can be alkylated by bromopyruvate, resulting in the loss of oxidative decarboxylation and the subsequent enhancement of pyruvate reductase activity [[cite:PUB00000616]]. The alkylated form is able to bind NADPH but not L-malate, indicating impaired substrate-or divalent metal ion-binding in the active site [[cite:PUB00000616]]. Sequence analysis has highlighted a cysteine residue as the point of alkylation, suggesting that it may play an important role in the activity of the enzyme [[cite:PUB00000616]], although it is absent in the sequences from some species.</p> <p>There are three well conserved regions in the enzyme sequences. Two of them seem to be involved in the binding NAD or NADP. The significance of the third one, located in the central part of the enzymes, is not yet known.</p>

This description is obtained from EB-eye REST.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Malic enzyme activity Catalysis of the oxidative decarboxylation of malate with the concomitant production of pyruvate.
Molecular function Malate dehydrogenase (decarboxylating) (NAD+) activity Catalysis of the reaction: (S)-malate + NAD+ = pyruvate + CO2 + NADH + H+.

Associated Lotus transcripts 40

Transcript Name Description Predicted domains Domain count
NADP dependent malic enzyme [Phaseolus vulgaris] gi|510876|emb|CAA56354.1| 16
PREDICTED: NADP-dependent malic enzyme-like [Cicer arietinum] gi|502131779|ref|XP_004501098.1| 20
PREDICTED: NADP-dependent malic enzyme, chloroplastic-like [Glycine max] gi|356556489|ref|XP_003546557.1| 10
PREDICTED: NAD-dependent malic enzyme 62 kDa isoform, mitochondrial-like [Glycine max] gi|356503178|ref|XP_003520388.1| 19
PREDICTED: NADP-dependent malic enzyme, chloroplastic-like [Glycine max] gi|356556489|ref|XP_003546557.1| 20
PREDICTED: NADP-dependent malic enzyme-like [Cicer arietinum] gi|502138643|ref|XP_004503480.1| 19
Malic enzyme; TAIR: AT5G25880.1 NADP-malic enzyme 3; Swiss-Prot: sp|P12628|MAOX_PHAVU NADP-dependent malic enzyme; TrEMBL-Plants: tr|A0A151RKB6|A0A151RKB6_CAJCA Malic enzyme; Found in the gene: LotjaGi1g1v0408700 20
Malic enzyme; TAIR: AT5G25880.1 NADP-malic enzyme 3; Swiss-Prot: sp|P12628|MAOX_PHAVU NADP-dependent malic enzyme; TrEMBL-Plants: tr|A0A151RKB6|A0A151RKB6_CAJCA Malic enzyme; Found in the gene: LotjaGi1g1v0408700 21
Malic enzyme; TAIR: AT5G25880.1 NADP-malic enzyme 3; Swiss-Prot: sp|P12628|MAOX_PHAVU NADP-dependent malic enzyme; TrEMBL-Plants: tr|A0A151RKB6|A0A151RKB6_CAJCA Malic enzyme; Found in the gene: LotjaGi1g1v0408700 21
Malic enzyme; TAIR: AT5G25880.1 NADP-malic enzyme 3; Swiss-Prot: sp|P12628|MAOX_PHAVU NADP-dependent malic enzyme; TrEMBL-Plants: tr|A0A151RKB6|A0A151RKB6_CAJCA Malic enzyme; Found in the gene: LotjaGi1g1v0408700 20
Malic enzyme; TAIR: AT5G25880.1 NADP-malic enzyme 3; Swiss-Prot: sp|P12628|MAOX_PHAVU NADP-dependent malic enzyme; TrEMBL-Plants: tr|A0A151RKB6|A0A151RKB6_CAJCA Malic enzyme; Found in the gene: LotjaGi1g1v0408700 20
Malic enzyme; TAIR: AT5G25880.1 NADP-malic enzyme 3; Swiss-Prot: sp|P12628|MAOX_PHAVU NADP-dependent malic enzyme; TrEMBL-Plants: tr|A0A151RKB6|A0A151RKB6_CAJCA Malic enzyme; Found in the gene: LotjaGi1g1v0408700 20
Malic enzyme; TAIR: AT1G79750.1 NADP-malic enzyme 4; Swiss-Prot: sp|P36444|MAOC_FLAPR NADP-dependent malic enzyme, chloroplastic; TrEMBL-Plants: tr|I1MCU4|I1MCU4_SOYBN Malic enzyme; Found in the gene: LotjaGi3g1v0021200 21
Malic enzyme; TAIR: AT1G79750.1 NADP-malic enzyme 4; Swiss-Prot: sp|P36444|MAOC_FLAPR NADP-dependent malic enzyme, chloroplastic; TrEMBL-Plants: tr|I1MCU4|I1MCU4_SOYBN Malic enzyme; Found in the gene: LotjaGi3g1v0021200 21
Malic enzyme; TAIR: AT1G79750.1 NADP-malic enzyme 4; Swiss-Prot: sp|Q9CA83|MAOP4_ARATH NADP-dependent malic enzyme 4, chloroplastic; TrEMBL-Plants: tr|I1MCU4|I1MCU4_SOYBN Malic enzyme; Found in the gene: LotjaGi3g1v0021200 19
Malic enzyme; TAIR: AT1G79750.1 NADP-malic enzyme 4; Swiss-Prot: sp|Q9CA83|MAOP4_ARATH NADP-dependent malic enzyme 4, chloroplastic; TrEMBL-Plants: tr|I1MCU4|I1MCU4_SOYBN Malic enzyme; Found in the gene: LotjaGi3g1v0021200 19
Malic enzyme; TAIR: AT1G79750.1 NADP-malic enzyme 4; Swiss-Prot: sp|P36444|MAOC_FLAPR NADP-dependent malic enzyme, chloroplastic; TrEMBL-Plants: tr|I1MCU4|I1MCU4_SOYBN Malic enzyme; Found in the gene: LotjaGi3g1v0021200 20
Malic enzyme; TAIR: AT1G79750.1 NADP-malic enzyme 4; Swiss-Prot: sp|Q9CA83|MAOP4_ARATH NADP-dependent malic enzyme 4, chloroplastic; TrEMBL-Plants: tr|K7M921|K7M921_SOYBN Malic enzyme; Found in the gene: LotjaGi3g1v0021200 17
Malic enzyme; TAIR: AT1G79750.1 NADP-malic enzyme 4; Swiss-Prot: sp|Q9CA83|MAOP4_ARATH NADP-dependent malic enzyme 4, chloroplastic; TrEMBL-Plants: tr|K7M921|K7M921_SOYBN Malic enzyme; Found in the gene: LotjaGi3g1v0021200 17
Malic enzyme; TAIR: AT2G13560.1 NAD-dependent malic enzyme 1; Swiss-Prot: sp|P37221|MAOM_SOLTU NAD-dependent malic enzyme 62 kDa isoform, mitochondrial; TrEMBL-Plants: tr|I1JMI9|I1JMI9_SOYBN Malic enzyme; Found in the gene: LotjaGi3g1v0072900 20
Malic enzyme; TAIR: AT2G13560.1 NAD-dependent malic enzyme 1; Swiss-Prot: sp|Q9SIU0|MAO1_ARATH NAD-dependent malic enzyme 1, mitochondrial; TrEMBL-Plants: tr|I1JMI9|I1JMI9_SOYBN Malic enzyme; Found in the gene: LotjaGi3g1v0072900 20
Malic enzyme; TAIR: AT2G13560.1 NAD-dependent malic enzyme 1; Swiss-Prot: sp|Q9SIU0|MAO1_ARATH NAD-dependent malic enzyme 1, mitochondrial; TrEMBL-Plants: tr|I1JMI9|I1JMI9_SOYBN Malic enzyme; Found in the gene: LotjaGi3g1v0072900 20
Malic enzyme; TAIR: AT1G79750.1 NADP-malic enzyme 4; Swiss-Prot: sp|P36444|MAOC_FLAPR NADP-dependent malic enzyme, chloroplastic; TrEMBL-Plants: tr|I1M5G8|I1M5G8_SOYBN Malic enzyme; Found in the gene: LotjaGi3g1v0371000 20
Malic enzyme; TAIR: AT1G79750.1 NADP-malic enzyme 4; Swiss-Prot: sp|P36444|MAOC_FLAPR NADP-dependent malic enzyme, chloroplastic; TrEMBL-Plants: tr|I1MCU4|I1MCU4_SOYBN Malic enzyme; Found in the gene: LotjaGi3g1v0371000 21
Malic enzyme; TAIR: AT1G79750.1 NADP-malic enzyme 4; Swiss-Prot: sp|P36444|MAOC_FLAPR NADP-dependent malic enzyme, chloroplastic; TrEMBL-Plants: tr|A0A151SHB6|A0A151SHB6_CAJCA Malic enzyme; Found in the gene: LotjaGi3g1v0371000 20
Malic enzyme; TAIR: AT1G79750.1 NADP-malic enzyme 4; Swiss-Prot: sp|P36444|MAOC_FLAPR NADP-dependent malic enzyme, chloroplastic; TrEMBL-Plants: tr|I1MCU4|I1MCU4_SOYBN Malic enzyme; Found in the gene: LotjaGi3g1v0371000 20
Malic enzyme; TAIR: AT1G79750.1 NADP-malic enzyme 4; Swiss-Prot: sp|P36444|MAOC_FLAPR NADP-dependent malic enzyme, chloroplastic; TrEMBL-Plants: tr|I1MCU4|I1MCU4_SOYBN Malic enzyme; Found in the gene: LotjaGi3g1v0371000 20
Malic enzyme; TAIR: AT1G79750.1 NADP-malic enzyme 4; Swiss-Prot: sp|Q9CA83|MAOP4_ARATH NADP-dependent malic enzyme 4, chloroplastic; TrEMBL-Plants: tr|I1MCU4|I1MCU4_SOYBN Malic enzyme; Found in the gene: LotjaGi3g1v0371000 19
Malic enzyme; TAIR: AT1G79750.1 NADP-malic enzyme 4; Swiss-Prot: sp|Q9CA83|MAOP4_ARATH NADP-dependent malic enzyme 4, chloroplastic; TrEMBL-Plants: tr|A0A0L9UNN0|A0A0L9UNN0_PHAAN Malic enzyme; Found in the gene: LotjaGi3g1v0371000 19
Malic enzyme; TAIR: AT4G00570.1 NAD-dependent malic enzyme 2; Swiss-Prot: sp|Q8L7K9|MAO2_ARATH NAD-dependent malic enzyme 2, mitochondrial; TrEMBL-Plants: tr|I1KIF0|I1KIF0_SOYBN Malic enzyme; Found in the gene: LotjaGi3g1v0378500 20
Malic enzyme; TAIR: AT4G00570.1 NAD-dependent malic enzyme 2; Swiss-Prot: sp|Q8L7K9|MAO2_ARATH NAD-dependent malic enzyme 2, mitochondrial; TrEMBL-Plants: tr|I1JKC3|I1JKC3_SOYBN Malic enzyme; Found in the gene: LotjaGi3g1v0378500 19
Malic enzyme; TAIR: AT4G00570.1 NAD-dependent malic enzyme 2; Swiss-Prot: sp|Q8L7K9|MAO2_ARATH NAD-dependent malic enzyme 2, mitochondrial; TrEMBL-Plants: tr|I1KIF0|I1KIF0_SOYBN Malic enzyme; Found in the gene: LotjaGi3g1v0378500 20
Malic enzyme; TAIR: AT4G00570.1 NAD-dependent malic enzyme 2; Swiss-Prot: sp|Q8L7K9|MAO2_ARATH NAD-dependent malic enzyme 2, mitochondrial; TrEMBL-Plants: tr|A0A1J7GW58|A0A1J7GW58_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0378500 20
Malic enzyme; TAIR: AT4G00570.1 NAD-dependent malic enzyme 2; Swiss-Prot: sp|Q8L7K9|MAO2_ARATH NAD-dependent malic enzyme 2, mitochondrial; TrEMBL-Plants: tr|I1JKC3|I1JKC3_SOYBN Malic enzyme; Found in the gene: LotjaGi3g1v0378500 17
Malic enzyme; TAIR: AT4G00570.1 NAD-dependent malic enzyme 2; Swiss-Prot: sp|Q8L7K9|MAO2_ARATH NAD-dependent malic enzyme 2, mitochondrial; TrEMBL-Plants: tr|I1JKC3|I1JKC3_SOYBN Malic enzyme; Found in the gene: LotjaGi3g1v0378500 17
Malic enzyme; TAIR: AT5G25880.1 NADP-malic enzyme 3; Swiss-Prot: sp|P51615|MAOX_VITVI NADP-dependent malic enzyme; TrEMBL-Plants: tr|K7KRR3|K7KRR3_SOYBN Malic enzyme; Found in the gene: LotjaGi4g1v0445900 20
Malic enzyme; TAIR: AT1G79750.1 NADP-malic enzyme 4; Swiss-Prot: sp|P51615|MAOX_VITVI NADP-dependent malic enzyme; TrEMBL-Plants: tr|A0A0B2S8Y3|A0A0B2S8Y3_GLYSO Malic enzyme; Found in the gene: LotjaGi4g1v0445900 20
Malic enzyme; TAIR: AT5G25880.1 NADP-malic enzyme 3; Swiss-Prot: sp|P51615|MAOX_VITVI NADP-dependent malic enzyme; TrEMBL-Plants: tr|A0A0B2S8Y3|A0A0B2S8Y3_GLYSO Malic enzyme; Found in the gene: LotjaGi4g1v0445900 20
Malic enzyme; TAIR: AT1G79750.1 NADP-malic enzyme 4; Swiss-Prot: sp|P51615|MAOX_VITVI NADP-dependent malic enzyme; TrEMBL-Plants: tr|V7CQB2|V7CQB2_PHAVU Malic enzyme; Found in the gene: LotjaGi4g1v0445900 20
Malic enzyme; TAIR: AT5G25880.1 NADP-malic enzyme 3; Swiss-Prot: sp|P51615|MAOX_VITVI NADP-dependent malic enzyme; TrEMBL-Plants: tr|V7CQB2|V7CQB2_PHAVU Malic enzyme; Found in the gene: LotjaGi4g1v0445900 19

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
SSF53223 SUPERFAMILY 1 2.50