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IPR003819 is a TauD/TfdA-like domain.
<p>This domain is found in TauD/TfdA taurine catabolism dioxygenases. The Escherichia coli tauD gene is required for the utilisation of taurine (2-aminoethanesulphonic acid) as a sulphur source and is expressed only under conditions of sulphate starvation. TauD is an alpha-ketoglutarate-dependent dioxygenase catalysing the oxygenolytic release of sulphite from taurine [[cite:PUB00008266]]. The 2,4-dichlorophenoxyacetic acid/alpha-ketoglutarate dioxygenase from Burkholderia sp. (strain RASC) also belongs to this family [[cite:PUB00008267]]. TfdA from Ralstonia eutropha (Alcaligenes eutrophus) is a 2,4-D monooxygenase [[cite:PUB00008268]].</p> <p>This domain is also found in gamma-butyrobetaine hydroxylase (GBBH), the enzyme responsible for the biosynthesis of L-carnitine, a key molecule of fatty acid metabolism. The GBBH monomer consists of this catalytic double-stranded β-helix (DBSH) domain, which is found in all 2-ketoglutarate (2KG) oxygenases, and a smaller N-terminal domain [[cite:PUB00075680]].</p>
This description is obtained from EB-eye REST.
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | PREDICTED: clavaminate synthase-like protein At3g21360-like [Glycine max] gi|356496006|ref|XP_003516861.1| | 6 | ||
| – | Clavaminate synthase-like protein [Medicago truncatula] gi|357454785|ref|XP_003597673.1| | 6 | ||
| – | Clavaminate synthase-like protein family; TAIR: AT3G21360.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; Swiss-Prot: sp|Q9LIG0|Y3136_ARATH Clavaminate synthase-like protein At3g21360; TrEMBL-Plants: tr|I3S881|I3S881_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0282600 | 7 | ||
| – | Clavaminate synthase-like protein family; TAIR: AT3G21360.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; Swiss-Prot: sp|Q9LIG0|Y3136_ARATH Clavaminate synthase-like protein At3g21360; TrEMBL-Plants: tr|C6T8I5|C6T8I5_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi3g1v0021600 | 7 | ||
| – | Clavaminate synthase-like protein family; TAIR: AT3G21360.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; Swiss-Prot: sp|Q9LIG0|Y3136_ARATH Clavaminate synthase-like protein At3g21360; TrEMBL-Plants: tr|C6T8I5|C6T8I5_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi3g1v0021600 | 7 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| SSF51197 | SUPERFAMILY | 1 | 20.00 |