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IPR004242 is a Transposon, En/Spm-like.
<p>This family includes a En/Spm-like transposable element, Tdc1 from carrot [[cite:PUB00007446]]. The function of these proteins is unknown.</p>
This description is obtained from EB-eye REST.
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | TNP2 [Antirrhinum majus] gi|1345502|emb|CAA40555.1| | 4 | ||
| – | TNP2 [Antirrhinum majus] gi|1345502|emb|CAA40555.1| | 6 | ||
| – | TNP2 [Antirrhinum majus] gi|1345502|emb|CAA40555.1| | 6 | ||
| – | TNP2 [Antirrhinum majus] gi|1345502|emb|CAA40555.1| | 6 | ||
| – | Transposon protein, putative, CACTA, En/Spm sub-class; TAIR: AT3G07610.3 Transcription factor jumonji (jmjC) domain-containing protein; Swiss-Prot: sp|P14779|CPXB_BACMB Bifunctional cytochrome P450/NADPH--P450 reductase; TrEMBL-Plants: tr|M1AR79|M1AR79_SOLTU Uncharacterized protein; Found in the gene: LotjaGi1g1v0115500_LC | 4 | ||
| – | Transposon protein, putative, CACTA, En/Spm sub-class; TAIR: AT2G19870.1 tRNA/rRNA methyltransferase (SpoU) family protein; Swiss-Prot: sp|Q08930|YP191_YEAST Ubiquitin carboxyl-terminal hydrolase MIY1; TrEMBL-Plants: tr|A5BU47|A5BU47_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0151900_LC | 8 | ||
| – | Transposon protein, putative, CACTA, En/Spm sub-class; TAIR: AT2G43410.1 RNA binding protein; Swiss-Prot: sp|Q60L58|SIR2_CAEBR NAD-dependent protein deacetylase sir-2.1; TrEMBL-Plants: tr|A0A1J6KY29|A0A1J6KY29_NICAT Uncharacterized protein; Found in the gene: LotjaGi1g1v0162400_LC | 5 | ||
| – | Transposon protein, putative, CACTA, En/Spm sub-class; TAIR: AT5G11610.1 Exostosin family protein; Swiss-Prot: sp|Q9CF42|RBSK_LACLA Ribokinase; TrEMBL-Plants: tr|A0A8Y2|A0A8Y2_IPOTF Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0423900_LC | 4 | ||
| – | Transposon protein, putative, CACTA, En/Spm sub-class; TAIR: AT4G38240.3 alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase; Swiss-Prot: sp|Q6NZQ8|MARH1_MOUSE E3 ubiquitin-protein ligase MARCH1; TrEMBL-Plants: tr|I1MHP5|I1MHP5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0052000_LC | 10 | ||
| – | Transposon protein, putative, CACTA, En/Spm sub-class; TAIR: AT2G29650.3 phosphate transporter 4;1; Swiss-Prot: sp|Q0AUH7|EFG2_SYNWW Elongation factor G 2; TrEMBL-Plants: tr|A0A151R5D1|A0A151R5D1_CAJCA Uncharacterized protein; Found in the gene: LotjaGi2g1v0142900_LC | 7 | ||
| – | Transposon protein, putative, CACTA, En/Spm sub-class; TAIR: AT4G40080.1 ENTH/ANTH/VHS superfamily protein; TrEMBL-Plants: tr|I1MHP5|I1MHP5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0163200_LC | 9 | ||
| – | Transposon protein, putative, CACTA, En/Spm sub-class; TAIR: AT2G32450.1 Calcium-binding tetratricopeptide family protein; Swiss-Prot: sp|Q1RHI2|RECN_RICBR DNA repair protein RecN; TrEMBL-Plants: tr|A0A151R5D1|A0A151R5D1_CAJCA Uncharacterized protein; Found in the gene: LotjaGi2g1v0194900_LC | 4 | ||
| – | Transposon protein, putative, CACTA, En/Spm sub-class; TAIR: AT2G32450.1 Calcium-binding tetratricopeptide family protein; Swiss-Prot: sp|Q1RHI2|RECN_RICBR DNA repair protein RecN; TrEMBL-Plants: tr|A0A151R5D1|A0A151R5D1_CAJCA Uncharacterized protein; Found in the gene: LotjaGi2g1v0194900_LC | 4 | ||
| – | Transposon protein, putative, CACTA, En/Spm sub-class; TAIR: AT2G32450.1 Calcium-binding tetratricopeptide family protein; Swiss-Prot: sp|Q1RHI2|RECN_RICBR DNA repair protein RecN; TrEMBL-Plants: tr|A0A151R5D1|A0A151R5D1_CAJCA Uncharacterized protein; Found in the gene: LotjaGi2g1v0194900_LC | 4 | ||
| – | Transposon protein, putative, CACTA, En/Spm sub-class; TAIR: AT1G78915.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|Q5B122|RT106_EMENI Histone chaperone rtt106; TrEMBL-Plants: tr|A0A151R5D1|A0A151R5D1_CAJCA Uncharacterized protein; Found in the gene: LotjaGi2g1v0194900_LC | 4 | ||
| – | Transposon protein, putative, CACTA, En/Spm sub-class; TAIR: AT3G54160.1 RNI-like superfamily protein; Swiss-Prot: sp|Q17043|APLY_APLKU Aplysianin-A; TrEMBL-Plants: tr|A0A151UDP2|A0A151UDP2_CAJCA Uncharacterized protein; Found in the gene: LotjaGi2g1v0307000_LC | 6 | ||
| – | Transposon protein, putative, CACTA, En/Spm sub-class; TAIR: AT2G19280.1 Pentatricopeptide repeat (PPR) superfamily protein; Swiss-Prot: sp|Q9NRA2|S17A5_HUMAN Sialin; TrEMBL-Plants: tr|A0A151RB78|A0A151RB78_CAJCA Uncharacterized protein; Found in the gene: LotjaGi3g1v0050700_LC | 9 | ||
| – | Transposon protein, putative, CACTA, En/Spm sub-class; TAIR: AT4G38240.3 alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase; TrEMBL-Plants: tr|I1MHP5|I1MHP5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0134000_LC | 10 | ||
| – | Transposon protein, putative, CACTA, En/Spm sub-class; TAIR: AT2G19870.1 tRNA/rRNA methyltransferase (SpoU) family protein; Swiss-Prot: sp|A0LSY4|SYL_ACIC1 Leucine--tRNA ligase; TrEMBL-Plants: tr|I1MHP5|I1MHP5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0186800_LC | 4 | ||
| – | Transposon protein, putative, CACTA, En/Spm sub-class; TAIR: AT1G19110.1 inter-alpha-trypsin inhibitor heavy chain-like protein; Swiss-Prot: sp|Q9NRA2|S17A5_HUMAN Sialin; TrEMBL-Plants: tr|A0A151RB78|A0A151RB78_CAJCA Uncharacterized protein; Found in the gene: LotjaGi4g1v0192300_LC | 4 | ||
| – | Transposon protein, putative, CACTA, En/Spm sub-class; TAIR: AT5G08560.1 transducin family protein / WD-40 repeat family protein; TrEMBL-Plants: tr|I1K2I9|I1K2I9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0111000_LC | 8 | ||
| – | Transposon protein, putative, CACTA, En/Spm sub-class, expressed; TAIR: AT1G24010.1 Polyketide cyclase/dehydrase and lipid transport superfamily protein; Swiss-Prot: sp|B8MZA3|PURA_ASPFN Adenylosuccinate synthetase; TrEMBL-Plants: tr|A0A1J6KFE9|A0A1J6KFE9_NICAT Uncharacterized protein; Found in the gene: LotjaGi6g1v0009900_LC | 7 | ||
| – | Transposon protein, putative, CACTA, En/Spm sub-class, expressed; TAIR: AT1G24010.1 Polyketide cyclase/dehydrase and lipid transport superfamily protein; Swiss-Prot: sp|B8MZA3|PURA_ASPFN Adenylosuccinate synthetase; TrEMBL-Plants: tr|A0A1J6KFE9|A0A1J6KFE9_NICAT Uncharacterized protein; Found in the gene: LotjaGi6g1v0009900_LC | 7 | ||
| – | Transposon protein, putative, CACTA, En/Spm sub-class; TAIR: AT4G38240.3 alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase; Swiss-Prot: sp|Q6NZQ8|MARH1_MOUSE E3 ubiquitin-protein ligase MARCH1; TrEMBL-Plants: tr|I1MHP5|I1MHP5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0026600_LC | 9 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| TRANSMEMBRANE | Phobius | 1 | 4.17 |