Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

IPR011112

Source: InterPro

Description

IPR011112 is a Rho termination factor, N-terminal.

<p>The Rho termination factor disengages newly transcribed RNA from its DNA template at certain, specific transcripts. It is thought that two copies of Rho bind to RNA and that Rho functions as a hexamer of protomers [[cite:PUB00014277]]. This domain is found to the N terminus of the RNA binding domain ([interpro:IPR011113]).</p>

This description is obtained from EB-eye REST.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0006353
Biological process DNA-templated transcription, termination The cellular process that completes DNA-templated transcription; the formation of phosphodiester bonds ceases, the RNA-DNA hybrid dissociates, and RNA polymerase releases the DNA.
Subterm of
Part of

Associated Lotus transcripts 3

Transcript Name Description Predicted domains Domain count
Lj5g3v1073930.1
– PREDICTED: SAP-like protein BP-73-like [Glycine max] gi|356537005|ref|XP_003537022.1|
Domains
13
Lj6g3v1984460.1
– Rho termination factor [Arabidopsis thaliana] gi|30684516|ref|NP_193609.2|
Domains
4
LotjaGi5g1v0181900.1
– SAP-like protein BP-73; TAIR: AT1G06190.1 Rho termination factor; Swiss-Prot: sp|Q94K75|RHON1_ARATH Rho-N domain-containing protein 1, chloroplastic; TrEMBL-Plants: tr|I1L8E4|I1L8E4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0181900
Domains
12

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 33.33