Domain Predictions — View

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IPR016833

Source: InterPro

Description

IPR016833 is a Putative sodium bile acid cotransporter.

<p>This family includes sodium/bile acid cotransporter 7 [[cite:PUB00057362]] and other uncharacterised proteins with sodium bile acid cotransporter domain; they are found both in prokaryotes and eukaryotes.They are related to the human bile acid:sodium symporters, which are transmembrane proteins functioning in the liver in the uptake of bile acids from portal blood plasma, a process mediated by the co-transport of Na<sup>+</sup> [[cite:PUB00004723]].</p>

This description is obtained from EB-eye REST.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 6

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0122759.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: sodium/bile acid cotransporter 7-like [Glycine max] gi\|356534671\|ref\|XP_003535876.1\|	Domains IPR016833 NON_CYTOPLASMIC_DOMAIN PTHR18640 PTHR18640:SF9 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION	8
Lj0g3v0294299.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: sodium/bile acid cotransporter 7-like [Glycine max] gi\|356534671\|ref\|XP_003535876.1\|	Domains CYTOPLASMIC_DOMAIN IPR016833 NON_CYTOPLASMIC_DOMAIN PF13593 PTHR18640 PTHR18640:SF9 TMhelix TRANSMEMBRANE	8
Lj0g3v0359869.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: sodium/bile acid cotransporter 7-like [Glycine max] gi\|356534671\|ref\|XP_003535876.1\|	Domains CYTOPLASMIC_DOMAIN IPR016833 NON_CYTOPLASMIC_DOMAIN PF13593 PTHR18640 PTHR18640:SF9 TMhelix TRANSMEMBRANE	8
Lj0g3v0359869.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: sodium/bile acid cotransporter 7-like [Glycine max] gi\|356534671\|ref\|XP_003535876.1\|	Domains CYTOPLASMIC_DOMAIN IPR016833 NON_CYTOPLASMIC_DOMAIN PF13593 PTHR18640 PTHR18640:SF9 TMhelix TRANSMEMBRANE	8
LotjaGi5g1v0132200_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Bile acid:sodium symporter, putative; TAIR: AT3G56160.1 Sodium Bile acid symporter family; Swiss-Prot: sp\|B8AJ09\|BASS4_ORYSI Probable sodium/metabolite cotransporter BASS4, chloroplastic; TrEMBL-Plants: tr\|I1LA03\|I1LA03_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0132200_LC	Domains CYTOPLASMIC_DOMAIN G3DSA:1.20.1530.20 IPR016833 IPR038770 NON_CYTOPLASMIC_DOMAIN PF13593 PTHR18640 PTHR18640:SF11 TMhelix TRANSMEMBRANE	10
LotjaGi5g1v0132200_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Bile acid:sodium symporter, putative; TAIR: AT3G56160.2 Sodium Bile acid symporter family; Swiss-Prot: sp\|B8AJ09\|BASS4_ORYSI Probable sodium/metabolite cotransporter BASS4, chloroplastic; TrEMBL-Plants: tr\|I1LA03\|I1LA03_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0132200_LC	Domains CYTOPLASMIC_DOMAIN G3DSA:1.20.1530.20 IPR016833 IPR038770 NON_CYTOPLASMIC_DOMAIN PF13593 PTHR18640 PTHR18640:SF11 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION TMhelix TRANSMEMBRANE	14

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
TRANSMEMBRANE	Phobius	1	16.67