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IPR029004

Source: InterPro

Description

IPR029004 is a Ribosomal eL28/Mak16.

<p>Ribosomal protein eL28 forms part of the 60S ribosomal subunit [[cite:PUB00000194]]. This entry is found in eukaryotes. In rat there are 9 or 10 copies of the eL28 gene. The eL28 protein contains a possible internal duplication of 9 residues [[cite:PUB00006252]].</p> <p>In budding yeast, Mak16 forms part of the 66S pre-ribosomal particles and functions as a transacting actor involved in rRNA processing [[cite:PUB00070212], [cite:PUB00069757]].</p> <p>This entry represents a ribosomal L28e domain that also matches the N-terminal region of Mak16.</p>

This description is obtained from EB-eye REST.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 7

Transcript Name Description Predicted domains Domain count
Lj1g3v2626220.1
– PREDICTED: protein MAK16 homolog B-like isoform X1 [Cicer arietinum] gi|502146891|ref|XP_004506652.1|
Domains
9
Lj3g3v0290520.1
– PREDICTED: 60S ribosomal protein L28-2 [Glycine max] gi|356550472|ref|XP_003543611.1|
Domains
4
Lj3g3v2707730.1
– PREDICTED: 60S ribosomal protein L28-2 [Glycine max] gi|356550472|ref|XP_003543611.1|
Domains
5
LotjaGi1g1v0471000.1
– Protein mak16; TAIR: AT1G23280.1 MAK16 protein-like protein; Swiss-Prot: sp|Q9UTE6|MAK16_SCHPO Protein mak16; TrEMBL-Plants: tr|V7AEK8|V7AEK8_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0471000
Domains
10
LotjaGi3g1v0023200.1
– 60S ribosomal L28-like protein; TAIR: AT4G29410.1 Ribosomal L28e protein family; Swiss-Prot: sp|Q9M0E2|RL282_ARATH 60S ribosomal protein L28-2; TrEMBL-Plants: tr|I3S3F4|I3S3F4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0023200
Domains
6
LotjaGi3g1v0023200.2
– 60S ribosomal L28-like protein; TAIR: AT4G29410.1 Ribosomal L28e protein family; Swiss-Prot: sp|Q9M0E2|RL282_ARATH 60S ribosomal protein L28-2; TrEMBL-Plants: tr|I3S3F4|I3S3F4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0023200
Domains
6
LotjaGi3g1v0428200.1
– 60S ribosomal L28-like protein; TAIR: AT4G29410.1 Ribosomal L28e protein family; Swiss-Prot: sp|Q9M0E2|RL282_ARATH 60S ribosomal protein L28-2; TrEMBL-Plants: tr|I3S4F8|I3S4F8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0428200
Domains
6

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
PTHR10544:SF8 PANTHER 1 14.29