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IPR034275

Description

IPR034275 is a Ascorbate oxidase homologue, third cupredoxin domain.

<p>The proteins in this subfamily share homology to ascorbate oxidase and other members of the blue copper oxidase family. Expression of protein NTP303 from Nicotiana tabacum is detected during germination and pollen tube growth [[cite:PUB00083054]]. Ascorbate oxidase is a member of the multicopper oxidase (MCO) family that couples oxidation of substrates with reduction of dioxygen to water.</p> <p>MCOs are capable of oxidizing a vast range of substrates, varying from aromatic compounds to inorganic compounds such as metals. Although the members of this family have diverse functions, majority of them have three cupredoxin domain repeats. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper centre and transferring them to the active site trinuclear copper centre. The cupredoxin domain 3 of 3-domain MCOs contains the Type 1 (T1) copper binding site and part of the trinuclear copper binding site, which is located at the interface of domains 1 and 3. This subfamily does not harbour T1 copper or trinuclear copper binding sites [[cite:PUB00019363]].</p>

This description is obtained from EB-eye REST.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Copper ion binding Interacting selectively and non-covalently with copper (Cu) ions.

Associated Lotus transcripts 8

Transcript Name Description Predicted domains Domain count
L-ascorbate oxidase like; TAIR: AT1G76160.1 SKU5 similar 5; Swiss-Prot: sp|Q00624|ASOL_BRANA L-ascorbate oxidase homolog; TrEMBL-Plants: tr|A0A072VDP0|A0A072VDP0_MEDTR Multi-copper oxidase-like protein; Found in the gene: LotjaGi1g1v0433900 24
L-ascorbate oxidase like; TAIR: AT1G76160.1 SKU5 similar 5; Swiss-Prot: sp|Q00624|ASOL_BRANA L-ascorbate oxidase homolog; TrEMBL-Plants: tr|A0A072VDP0|A0A072VDP0_MEDTR Multi-copper oxidase-like protein; Found in the gene: LotjaGi1g1v0433900 11
L-ascorbate oxidase like; TAIR: AT1G76160.1 SKU5 similar 5; Swiss-Prot: sp|Q00624|ASOL_BRANA L-ascorbate oxidase homolog; TrEMBL-Plants: tr|A0A072VDP0|A0A072VDP0_MEDTR Multi-copper oxidase-like protein; Found in the gene: LotjaGi1g1v0433900 11
L-ascorbate oxidase like; TAIR: AT4G22010.1 SKU5 similar 4; Swiss-Prot: sp|Q00624|ASOL_BRANA L-ascorbate oxidase homolog; TrEMBL-Plants: tr|A0A151RMQ3|A0A151RMQ3_CAJCA L-ascorbate oxidase isogeny; Found in the gene: LotjaGi3g1v0187600 21
L-ascorbate oxidase like; TAIR: AT1G76160.1 SKU5 similar 5; Swiss-Prot: sp|P29162|ASOL_TOBAC L-ascorbate oxidase homolog; TrEMBL-Plants: tr|I1LIP3|I1LIP3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0533100 21
L-ascorbate oxidase like; TAIR: AT1G76160.1 SKU5 similar 5; Swiss-Prot: sp|Q00624|ASOL_BRANA L-ascorbate oxidase homolog; TrEMBL-Plants: tr|A0A072VFN2|A0A072VFN2_MEDTR Multi-copper oxidase-like protein; Found in the gene: LotjaGi5g1v0001500 22
L-ascorbate oxidase like; TAIR: AT1G76160.1 SKU5 similar 5; Swiss-Prot: sp|Q00624|ASOL_BRANA L-ascorbate oxidase homolog; TrEMBL-Plants: tr|I1MBZ7|I1MBZ7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0001500 11
L-ascorbate oxidase like; TAIR: AT1G76160.1 SKU5 similar 5; Swiss-Prot: sp|Q00624|ASOL_BRANA L-ascorbate oxidase homolog; TrEMBL-Plants: tr|I1MBZ7|I1MBZ7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0001500 11

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
cd13894 CDD 1 12.50