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IPR036195

Source: InterPro

Description

IPR036195 is a Alpha-L-arabinofuranosidase B, arabinose-binding domain superfamily.

<p>Alpha-L-arabinofuranosidase B (AkAbfB) comprises two domains: a catalytic domain and an arabinose-binding domain (ABD). This entry represents the ABD domain. ABD has a β-trefoil fold similar to that of carbohydrate-binding module (CBM) family 13 but also with a number of distinctive characteristics, suggesting that it could be classified into a new CBM family [[cite:PUB00035358]].</p>

This description is obtained from EB-eye REST.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0046373
Biological process L-arabinose metabolic process The chemical reactions and pathways involving L-arabinose, the D-enantiomer of arabino-pentose. L-arabinose occurs free, e.g. in the heartwood of many conifers, and in the combined state, in both furanose and pyranose forms, as a constituent of various plant hemicelluloses, bacterial polysaccharides etc.
Subterm of
GO:0046556
Molecular function Alpha-L-arabinofuranosidase activity Catalysis of the hydrolysis of terminal non-reducing alpha-L-arabinofuranoside residues in alpha-L-arabinosides.
Subterm of

Associated Lotus transcripts 1

Transcript Name Description Predicted domains Domain count
LotjaGi3g1v0495000.1
– DUF1680 domain protein; TAIR: AT5G12950.1 proline-tRNA ligase (DUF1680); Swiss-Prot: sp|E8MGH8|HYBA1_BIFL2 Non-reducing end beta-L-arabinofuranosidase; TrEMBL-Plants: tr|A0A0B2QNZ2|A0A0B2QNZ2_GLYSO Uncharacterized protein; Found in the gene: LotjaGi3g1v0495000
Domains
15

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
SignalP-noTM SignalP_GRAM_NEGATIVE 1 100.00